Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g006040 Solanum pennellii HOM05D000107 ORTHO05D000062 1.8e-37 158.7 75 100.0
Sopen06g015790 Solanum pennellii HOM05D000004 ORTHO05D000062 1.2e-25 119.4 62 90.3
Sopen12g025550 Solanum pennellii HOM05D000107 ORTHO05D000062 1.7e-24 115.5 62 87.1
Sopen09g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-21 105.1 61 83.6
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 5.2e-21 104.0 62 79.0
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 5.2e-21 104.0 76 68.4
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 6.7e-21 103.6 62 79.0
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 6.7e-21 103.6 62 79.0
Sopen12g025990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-20 102.1 62 77.4
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 2.6e-20 101.7 61 78.7
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 2.6e-20 101.7 62 77.4
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 7.4e-20 100.1 62 77.4
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 7.4e-20 100.1 62 77.4
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 1.7e-19 99.0 56 82.1
Sopen05g025940 Solanum pennellii HOM05D000107 ORTHO05D000062 2.8e-19 98.2 62 74.2
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 3.7e-19 97.8 61 75.4
Sopen02g004720 Solanum pennellii HOM05D000107 ORTHO05D000062 5.3e-18 94.0 62 72.6
Sopen10g018620 Solanum pennellii HOM05D000107 ORTHO05D000062 5.9e-17 90.5 63 68.3
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-16 89.7 50 82.0
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 5.0e-16 87.4 70 60.0
Sopen11g007930 Solanum pennellii HOM05D000107 ORTHO05D000062 6.5e-16 87.0 53 75.5
Sopen09g018620 Solanum pennellii HOM05D000107 ORTHO05D009932 2.5e-15 85.1 63 65.1
Sopen10g014330 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-14 82.8 51 74.5
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 1.4e-13 79.3 61 60.7
TPR.G32034 Trifolium pratense HOM05D000107 ORTHO05D000062 3.4e-12 74.7 61 57.4
Sopen07g013940 Solanum pennellii HOM05D000107 ORTHO05D000062 9.7e-12 73.2 51 68.6
Ca_13698_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.7e-11 72.4 61 55.7
TPR.G18679 Trifolium pratense HOM05D000107 ORTHO05D000062 2.8e-11 71.6 61 55.7
EL10Ac6g14682 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-11 70.9 63 58.7
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 6.3e-11 70.5 60 58.3
arahy.Tifrunner.gnm1.ann1.EFR0N4 Arachis hypogaea HOM05D000107 ORTHO05D000062 3.1e-10 68.2 57 57.9
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 3.1e-10 68.2 60 56.7
Sopen06g007570 Solanum pennellii HOM05D000107 ORTHO05D000062 3.1e-10 68.2 60 56.7
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 1.2e-09 66.2 57 56.1
Sopen05g023540 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-09 66.2 60 55.0
Ca_24070_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.0e-09 65.5 47 61.7
EL10Ac9g22639 Beta vulgaris HOM05D000107 ORTHO05D000062 3.5e-09 64.7 58 55.2
EL10Ac4g08808 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-08 63.2 57 52.6
EL10Ac9g22618 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-08 62.0 57 56.1
AUR62002808 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-08 62.0 59 52.5
AUR62041594 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-08 62.0 62 48.4
AUR62043404 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.5e-08 60.1 67 47.8
Lj1g0007648 Lotus japonicus HOM05D000107 ORTHO05D003213 1.1e-07 59.7 49 57.1
ECA248G0231 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.2e-07 57.8 58 48.3
Ah.01g011060 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.2e-07 57.0 62 48.4
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.2e-07 57.0 62 48.4
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.2e-07 57.0 62 48.4
EL10Ac3g06913 Beta vulgaris HOM05D010065 ORTHO05D016691 9.4e-07 56.6 67 49.3
TPR.G18281 Trifolium pratense HOM05D000107 ORTHO05D051464 1.2e-06 56.2 35 74.3
AUR62041533 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-06 55.5 62 41.9
AUR62042873 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-06 55.1 76 39.5
HanXRQChr05g0140971 Helianthus annuus HOM05D000107 ORTHO05D000062 2.7e-06 55.1 63 42.9
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 2.7e-06 55.1 63 42.9
Lalb_Chr20g0115001 Lupinus albus HOM05D000107 ORTHO05D000062 2.7e-06 55.1 45 60.0
Ah.06g185380 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.6e-06 54.7 62 46.8
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.6e-06 54.7 71 42.3
EL10Ac2g02999 Beta vulgaris HOM05D004615 ORTHO05D000062 4.7e-06 54.3 66 45.5
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 4.7e-06 54.3 58 43.1
TAR709G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000568 6.1e-06 53.9 60 48.3
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.0e-06 53.5 60 46.7


User provided reference genes

Program Settings