Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 6.2e-252 873.6 434 100.0
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 8.7e-246 853.2 434 97.2
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 2.5e-229 798.5 435 92.2
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 1.7e-193 679.5 435 78.9
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 2.0e-181 639.4 435 76.6
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 6.6e-177 624.4 435 74.5
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 2.4e-171 605.9 437 71.9
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 1.1e-147 527.3 444 63.7
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 5.1e-145 518.5 457 63.7
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 3.8e-140 502.3 437 62.0
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 7.8e-138 494.6 437 60.6
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 7.1e-131 471.5 437 59.0
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 7.1e-123 444.9 413 60.0
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 1.1e-104 384.4 443 51.5
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 6.1e-98 362.1 448 50.0
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 8.8e-97 358.2 447 49.4
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 7.0e-94 348.6 435 49.4
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 7.0e-94 348.6 438 48.6
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 2.6e-93 346.7 445 47.6
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 1.1e-91 341.3 437 49.0
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.9e-83 313.9 257 61.9
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 2.7e-82 310.1 438 44.3
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 5.7e-80 302.4 236 61.0
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 2.2e-79 300.4 436 44.0
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 4.8e-79 299.3 446 43.7
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 9.1e-78 295.0 168 81.0
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 1.1e-75 288.1 227 60.4
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 1.9e-75 287.3 227 60.4
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 4.2e-75 286.2 227 59.5
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.0e-73 281.6 257 56.8
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.0e-73 281.6 257 56.8
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 2.3e-73 280.4 447 40.0
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 1.0e-68 265.0 224 58.9
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 2.9e-68 263.5 205 63.9
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 2.1e-42 177.6 150 56.0
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 2.4e-17 94.4 73 58.9
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 4.8e-10 70.1 183 26.8
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 2.9e-07 60.8 186 28.5
Migut.N00933 Erythranthe guttata HOM05D000886 ORTHO05D000525 3.8e-07 60.5 116 36.2
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 1.4e-06 58.5 106 34.9
Manes.11G141300 Manihot esculenta HOM05D000886 ORTHO05D000525 2.5e-06 57.8 132 28.0
Aqoxy3G03479 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 4.2e-06 57.0 113 31.9
FAN26G1429 Fragaria x ananassa HOM05D000886 ORTHO05D000525 5.5e-06 56.6 217 26.7


User provided reference genes

Program Settings