Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.1e-112 409.1 212 100.0
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.3e-106 389.8 212 96.2
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 3.4e-94 348.6 214 86.9
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 1.4e-63 246.9 218 66.1
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.1e-60 237.3 218 67.0
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.9e-54 214.9 211 64.5
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 5.7e-49 198.4 384 39.8
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.1e-47 194.1 223 57.0
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.0e-45 185.3 219 55.7
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 3.6e-43 179.1 213 54.5
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 5.1e-42 175.3 218 54.1
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 5.1e-42 175.3 232 48.7
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 8.8e-42 174.5 213 53.5
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 2.6e-41 172.9 219 52.1
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 5.7e-41 171.8 225 50.2
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 6.3e-40 168.3 227 50.7
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 8.2e-40 167.9 237 49.4
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 8.2e-40 167.9 237 49.4
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 8.2e-40 167.9 213 53.1
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.1e-39 167.5 233 47.6
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 1.4e-39 167.2 233 46.8
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 1.2e-38 164.1 251 48.6
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 1.6e-38 163.7 243 47.3
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 2.6e-38 162.9 207 49.8
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.6e-38 162.9 239 44.8
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 1.0e-37 161.0 225 47.1
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.7e-37 160.2 266 45.9
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 1.7e-37 160.2 243 47.7
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 5.0e-37 158.7 223 46.6
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 6.5e-37 158.3 228 46.1
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 6.5e-37 158.3 223 48.4
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.1e-36 157.5 209 47.4
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 1.1e-36 157.5 242 45.5
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 1.9e-36 156.8 253 44.7
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 2.5e-36 156.4 229 48.9
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 2.5e-36 156.4 226 46.9
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.2e-35 154.1 209 47.4
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.2e-35 154.1 209 47.4
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.2e-35 154.1 189 52.9
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 1.2e-35 154.1 245 43.7
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 1.2e-35 154.1 237 46.8
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.6e-35 153.7 211 45.5
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 2.7e-35 152.9 215 47.0
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 3.6e-35 152.5 208 47.6
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 1.0e-34 151.0 209 46.9
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 1.8e-34 150.2 216 47.2
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 1.8e-34 150.2 209 45.9
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 2.3e-34 149.8 220 45.0
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 4.0e-34 149.1 233 45.5
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 4.0e-34 149.1 231 43.3
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 5.2e-34 148.7 227 46.7
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 6.7e-34 148.3 240 46.7
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 1.5e-33 147.1 210 45.7
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 2.0e-33 146.7 208 46.2
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 2.0e-33 146.7 226 46.9
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 2.0e-33 146.7 259 45.2
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.6e-33 146.4 229 42.8
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 3.3e-33 146.0 236 45.3
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 5.7e-33 145.2 227 44.5
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 5.7e-33 145.2 210 45.2
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 7.5e-33 144.8 208 45.7
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 9.7e-33 144.4 214 47.7
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 2.8e-32 142.9 214 46.3
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 4.8e-32 142.1 233 45.9
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 4.8e-32 142.1 263 44.9
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 8.2e-32 141.4 228 46.1
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 2.4e-31 139.8 231 42.9
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 2.4e-31 139.8 211 44.5
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 2.4e-31 139.8 242 42.1
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.4e-31 139.8 174 52.9
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 2.4e-31 139.8 239 44.4
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 2.4e-31 139.8 219 46.6
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 4.1e-31 139.0 245 41.2
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 4.1e-31 139.0 238 43.3
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 5.3e-31 138.7 226 43.8
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 7.0e-31 138.3 208 44.7
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 9.1e-31 137.9 198 46.5
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 9.1e-31 137.9 209 45.5
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 1.2e-30 137.5 208 44.7
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.2e-30 137.5 224 44.2
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 2.7e-30 136.3 235 45.1
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.5e-30 136.0 221 43.0
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 4.5e-30 135.6 209 44.0
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 4.5e-30 135.6 210 43.8
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 5.9e-30 135.2 223 43.9
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 7.7e-30 134.8 247 41.7
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 7.7e-30 134.8 230 43.9
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 1.3e-29 134.0 258 39.5
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 1.7e-29 133.7 194 45.4
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 2.9e-29 132.9 231 44.2
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 3.8e-29 132.5 213 44.1
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 5.0e-29 132.1 230 40.9
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 5.0e-29 132.1 229 43.7
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 6.5e-29 131.7 271 39.5
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 6.5e-29 131.7 221 43.0
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 1.1e-28 131.0 88 76.1
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 1.1e-28 131.0 215 41.9
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 1.5e-28 130.6 258 38.4
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.9e-28 130.2 214 43.5
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.9e-28 130.2 82 75.6
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 2.5e-28 129.8 209 42.6
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.5e-28 129.8 230 40.4
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 5.5e-28 128.6 87 72.4
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 1.2e-27 127.5 236 40.7
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 2.7e-27 126.3 204 43.1
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 3.6e-27 125.9 254 38.6
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 6.1e-27 125.2 208 41.3
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 6.1e-27 125.2 208 41.3
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 8.0e-27 124.8 248 39.1
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 1.0e-26 124.4 176 46.0
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.8e-26 123.6 205 43.9
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 2.3e-26 123.2 265 37.7
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 1.2e-25 120.9 136 50.0
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 1.5e-25 120.6 248 38.7
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.0e-25 120.2 249 40.2
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.6e-25 119.8 224 40.6
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 3.4e-25 119.4 86 68.6
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 4.4e-25 119.0 224 38.8
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 7.5e-25 118.2 190 42.1
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 9.8e-25 117.9 207 39.6
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 2.2e-24 116.7 94 59.6
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 3.7e-24 115.9 151 48.3
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 8.3e-24 114.8 127 50.4
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 1.4e-23 114.0 195 41.5
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.8e-23 113.6 208 41.3
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 1.8e-23 113.6 236 40.3
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 2.4e-23 113.2 208 41.8
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 2.4e-23 113.2 208 41.8
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 4.1e-23 112.5 251 37.5
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 9.1e-23 111.3 182 40.7
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.6e-22 110.5 219 43.4
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 1.0e-21 107.8 231 34.6
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 2.1e-19 100.1 210 37.6
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 3.6e-19 99.4 67 71.6
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.5e-17 94.0 189 40.7
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 5.7e-17 92.0 80 58.8
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.2e-16 90.1 128 43.8
Nitab4.5_0000893g0100 Nicotiana tabacum HOM05D004801 ORTHO05D005747 6.3e-16 88.6 106 55.7
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 1.8e-15 87.0 207 34.8
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 8.6e-13 78.2 91 49.5
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 3.6e-11 72.8 230 31.7
Cpa.g.sc34.169 Carica papaya HOM05D004801 ORTHO05D005747 4.7e-11 72.4 155 36.1
AT1G52270 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.7e-08 63.9 152 33.6
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 5.4e-07 58.9 166 33.1
BcaC08g44096 Brassica carinata HOM05D004801 ORTHO05D005747 1.6e-06 57.4 40 67.5
MSTRG.14327 Avicennia marina HOM05D004801 ORTHO05D005747 7.8e-06 55.1 118 40.7


User provided reference genes

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