Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 4.5e-135 484.6 243 100.0
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 1.5e-109 399.8 243 84.4
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 2.6e-98 362.5 244 78.7
PGSC0003DMG400021274 Solanum tuberosum HOM05D016660 ORTHO05D006345 4.0e-91 338.6 329 61.1
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 8.4e-81 304.3 334 54.8
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 3.8e-49 199.1 122 82.0
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 2.7e-47 193.0 122 80.3
PGSC0003DMG400044091 Solanum tuberosum HOM05D016660 ORTHO05D006345 1.0e-38 164.5 114 75.4
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.6e-23 112.8 402 28.9
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.6e-21 106.7 337 30.3
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 3.2e-19 99.8 122 50.0
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.0e-17 94.7 423 26.0
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.3e-17 93.6 152 44.1
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.5e-16 90.9 347 28.0
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.3e-16 89.7 388 26.5
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 7.3e-16 88.6 340 30.0
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 2.3e-14 83.6 412 26.5
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 1.5e-13 80.9 120 38.3
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 8.3e-12 75.1 391 26.6
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.4e-11 74.3 107 44.9
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 6.0e-10 68.9 128 37.5
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.3e-09 67.0 151 34.4
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.6e-09 65.5 388 25.8
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 7.3e-08 62.0 392 25.3
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.2e-07 61.2 362 25.7
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.2e-07 61.2 157 28.0
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 1.2e-07 61.2 360 26.1
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 2.1e-07 60.5 162 30.2
Sopen03g025470 Solanum pennellii HOM05D016660 ORTHO05D006345 2.1e-07 60.5 41 68.3
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 1.8e-06 57.4 385 24.4
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.1e-06 56.6 102 35.3


User provided reference genes

Program Settings