Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 1.2e-237 826.2 443 100.0
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 5.1e-217 757.7 461 88.3
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 2.5e-107 393.3 260 76.5
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 1.2e-101 374.4 536 48.7
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 9.7e-51 205.3 457 37.6
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 2.8e-50 203.8 307 46.3
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 1.9e-46 191.0 297 45.1
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 5.5e-46 189.5 364 40.7
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 2.7e-45 187.2 296 43.9
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 3.6e-45 186.8 297 44.4
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 4.7e-45 186.4 326 41.7
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 7.7e-40 169.1 332 39.2
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 7.2e-38 162.5 274 45.3
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 3.6e-37 160.2 307 41.7
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 3.0e-36 157.1 347 36.9
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 3.0e-36 157.1 293 42.3
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 4.0e-36 156.8 349 38.4
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 1.2e-35 155.2 363 34.4
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 2.0e-35 154.5 274 40.9
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 4.8e-34 149.8 336 33.9
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 6.3e-34 149.4 331 36.9
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 7.0e-33 146.0 366 36.3
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.2e-32 145.2 330 36.7
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 1.6e-32 144.8 373 39.7
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 3.5e-32 143.7 237 46.8
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 1.0e-31 142.1 312 36.2
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 1.3e-31 141.7 256 39.1
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.3e-31 141.7 184 50.5
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 1.3e-31 141.7 259 39.0
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 1.3e-31 141.7 104 79.8
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 2.2e-31 141.0 225 41.3
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 3.8e-31 140.2 338 34.9
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 2.5e-30 137.5 363 32.0
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 3.2e-30 137.1 225 43.1
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 9.4e-30 135.6 309 35.9
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 1.6e-29 134.8 296 38.2
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 2.1e-29 134.4 289 34.9
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 2.1e-29 134.4 321 35.5
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 2.1e-29 134.4 218 43.1
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.7e-29 134.0 325 33.8
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 6.1e-29 132.9 183 44.8
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 6.1e-29 132.9 228 44.3
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 1.8e-28 131.3 266 34.2
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 5.2e-28 129.8 303 34.7
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 5.2e-28 129.8 289 38.4
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 6.8e-28 129.4 200 45.0
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 8.8e-28 129.0 239 43.5
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 8.8e-28 129.0 264 34.8
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 8.8e-28 129.0 204 46.1
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 8.8e-28 129.0 201 41.3
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 8.8e-28 129.0 294 33.7
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.2e-27 128.6 230 41.7
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 1.2e-27 128.6 344 31.7
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 1.5e-27 128.3 256 41.0
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 2.6e-27 127.5 273 33.7
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 3.4e-27 127.1 189 40.7
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 2.2e-26 124.4 316 37.0
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 2.8e-26 124.0 204 44.6
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 3.7e-26 123.6 179 48.6
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 4.9e-26 123.2 209 38.8
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 8.3e-26 122.5 287 38.7
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 8.3e-26 122.5 191 41.9
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 1.4e-25 121.7 291 31.6
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 1.8e-25 121.3 286 32.9
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 2.4e-25 120.9 388 29.9
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 3.1e-25 120.6 201 45.3
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 4.1e-25 120.2 383 32.6
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 5.4e-25 119.8 332 34.3
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 9.1e-25 119.0 222 42.3
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 1.6e-24 118.2 297 36.7
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 1.6e-24 118.2 441 32.9
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 2.7e-24 117.5 351 30.8
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 2.7e-24 117.5 385 33.5
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 3.5e-24 117.1 382 30.9
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 3.5e-24 117.1 281 35.2
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 4.5e-24 116.7 278 37.1
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 4.5e-24 116.7 383 32.4
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 5.9e-24 116.3 288 36.5
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 1.0e-23 115.5 222 41.4
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 1.3e-23 115.2 351 30.2
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 1.7e-23 114.8 190 46.3
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 2.3e-23 114.4 248 32.7
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 3.8e-23 113.6 474 28.9
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 5.0e-23 113.2 369 30.9
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 8.6e-23 112.5 232 42.7
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 1.9e-22 111.3 331 30.5
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 7.2e-22 109.4 262 30.5
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 3.6e-21 107.1 370 29.7
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 4.7e-21 106.7 187 38.0
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 4.7e-21 106.7 373 32.4
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 6.1e-21 106.3 257 37.7
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 6.1e-21 106.3 205 40.0
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 8.0e-21 105.9 213 39.0
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 1.4e-20 105.1 389 29.6
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 3.0e-20 104.0 137 41.6
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 3.0e-20 104.0 253 32.4
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 1.5e-19 101.7 233 33.9
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 3.4e-19 100.5 379 30.3
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 3.4e-19 100.5 284 35.2
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 4.4e-19 100.1 242 37.2
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 9.8e-19 99.0 243 31.7
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 2.2e-18 97.8 247 32.0
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 3.7e-18 97.1 268 35.8
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 3.7e-18 97.1 243 31.3
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 1.4e-17 95.1 99 46.5
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 1.8e-17 94.7 330 32.7
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 2.4e-17 94.4 241 32.0
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 4.1e-17 93.6 81 58.0
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 7.0e-17 92.8 250 32.4
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.6e-16 91.7 126 42.9
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 2.0e-16 91.3 245 31.8
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 1.1e-14 85.5 122 43.4
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.9e-14 84.7 257 35.8
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 2.5e-14 84.3 302 27.8
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 1.2e-13 82.0 423 29.8
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 4.0e-12 77.0 449 29.8
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 4.0e-12 77.0 149 32.9
Sopen10g003160 Solanum pennellii HOM05D006067 ORTHO05D007327 3.7e-10 70.5 59 67.8
Lj1P829T26 Lonicera japonica HOM05D006067 ORTHO05D007327 3.2e-09 67.4 124 39.5
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 7.0e-09 66.2 195 29.2
Pp3c23_21590 Physcomitrium patens HOM05D006067 ORTHO05D007327 3.5e-08 63.9 98 38.8
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.3e-07 62.0 65 44.6
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 3.9e-07 60.5 274 25.2
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 8.6e-07 59.3 55 50.9


User provided reference genes

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