Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.1e-212 743.4 474 100.0
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.3e-82 311.2 464 46.6
Solyc10g006810.4 Solanum lycopersicum HOM05D007962 ORTHO05D009990 4.6e-75 286.2 206 98.5
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.8e-71 274.2 419 46.8
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 2.1e-43 181.0 320 41.2
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 4.8e-40 169.9 445 33.3
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 7.0e-39 166.0 322 37.6
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 1.1e-36 158.7 456 30.9
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.5e-36 157.5 333 36.9
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 2.5e-36 157.5 331 36.9
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 3.0e-34 150.6 317 37.2
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 6.8e-34 149.4 316 37.0
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.6e-33 147.5 325 36.9
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.7e-32 144.8 299 37.5
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.4e-31 141.7 319 37.0
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.8e-31 141.4 317 35.3
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.1e-31 140.6 317 36.3
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.1e-31 140.6 317 35.0
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 7.0e-31 139.4 299 37.1
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.1e-31 139.0 317 35.3
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.2e-30 138.7 373 32.7
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 3.5e-30 137.1 323 35.6
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.3e-29 135.2 464 30.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 1.7e-29 134.8 306 35.9
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.3e-29 134.4 304 36.2
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.1e-28 132.1 334 32.0
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.5e-28 131.7 361 33.8
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.9e-28 131.3 300 35.3
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.5e-28 131.0 310 36.5
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.2e-27 128.6 309 36.2
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 2.1e-27 127.9 453 29.6
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 2.1e-27 127.9 300 34.3
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 3.6e-27 127.1 411 29.9
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 5.2e-26 123.2 303 33.7
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.5e-25 121.7 308 34.4
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 2.6e-25 120.9 401 32.9
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 5.7e-25 119.8 271 34.7
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 7.5e-25 119.4 315 34.6
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.8e-24 117.5 300 31.3
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 1.1e-23 115.5 332 32.8
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.4e-23 114.4 422 29.4
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 2.4e-23 114.4 469 27.9
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 3.1e-23 114.0 306 36.9
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 3.5e-22 110.5 449 29.2
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 3.5e-22 110.5 275 30.5
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 5.9e-22 109.8 353 31.4
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 7.8e-22 109.4 272 29.8
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.9e-21 107.5 302 29.8
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 3.8e-21 107.1 340 30.9
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 5.0e-21 106.7 314 29.9
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 8.6e-21 105.9 276 34.8
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 6.1e-19 99.8 310 31.9
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 6.1e-19 99.8 296 29.7
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 8.0e-19 99.4 290 34.1
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.5e-17 95.1 312 32.7
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 5.8e-17 93.2 267 31.5
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 2.9e-16 90.9 269 30.5
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 4.1e-15 87.0 286 34.3
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 7.0e-15 86.3 378 28.6
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.2e-14 85.5 319 31.3
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 6.0e-14 83.2 246 36.2
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 7.8e-14 82.8 203 29.6
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 3.0e-13 80.9 269 30.5
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 8.6e-13 79.3 319 29.5
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.9e-12 78.2 333 29.4
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 3.6e-11 73.9 263 29.7
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 4.7e-11 73.6 192 37.5
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 8.0e-11 72.8 321 28.3
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.4e-10 72.0 310 30.6
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 2.3e-10 71.2 169 33.1
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 3.4e-09 67.4 186 29.0
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 4.4e-09 67.0 237 30.4
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 4.4e-09 67.0 319 28.8
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.4e-07 62.0 330 25.8
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 4.1e-07 60.5 262 29.0
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 4.1e-07 60.5 262 29.0
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 4.6e-06 57.0 366 26.5
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 6.0e-06 56.6 100 31.0


User provided reference genes

Program Settings