Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g002130 Solanum pennellii HOM05D001608 ORTHO05D014300 1.2e-36 156.0 79 100.0
PGSC0003DMG400014385 Solanum tuberosum HOM05D001608 ORTHO05D014300 1.2e-23 112.8 79 79.7
PGSC0003DMG400014419 Solanum tuberosum HOM05D001608 ORTHO05D002070 3.4e-15 84.7 61 73.8
PGSC0003DMG400009767 Solanum tuberosum HOM05D041053 ORTHO05D014300 1.4e-13 79.3 63 66.7
Solyc10g006173.1 Solanum lycopersicum HOM05D041053 ORTHO05D014300 7.1e-13 77.0 66 60.6
Sopen10g002150 Solanum pennellii HOM05D001608 ORTHO05D002070 4.3e-10 67.8 61 62.3
Cc05_g14080 Coffea canephora HOM05D001608 ORTHO05D002070 2.4e-08 62.0 62 59.7
Nitab4.5_0001393g0100 Nicotiana tabacum HOM05D001608 ORTHO05D002070 9.0e-08 60.1 61 57.4
Oeu026404.2 Olea europaea HOM05D001608 ORTHO05D002070 9.0e-08 60.1 62 56.5
Ciclev10010530m.g Citrus clementina HOM05D001608 ORTHO05D002070 1.2e-07 59.7 61 60.7
Ca_25811_v3 Cicer arietinum L. HOM05D001608 ORTHO05D002070 1.5e-07 59.3 63 55.6
Oeu008014.1 Olea europaea HOM05D001608 ORTHO05D002070 4.5e-07 57.8 62 53.2
Sopen10g002180 Solanum pennellii HOM05D001608 ORTHO05D002070 4.5e-07 57.8 63 58.7
QL08p008729 Quercus lobata HOM05D001608 ORTHO05D014300 9.9e-07 56.6 61 55.7
QL09p024286 Quercus lobata HOM05D001608 ORTHO05D002070 9.9e-07 56.6 61 55.7
THA.LOC104817897 Tarenaya hassleriana HOM05D001608 ORTHO05D002070 1.3e-06 56.2 62 58.1
THA.LOC104816911 Tarenaya hassleriana HOM05D001608 ORTHO05D002070 1.7e-06 55.8 61 54.1
Actinidia26615 Actinidia chinensis HOM05D001608 ORTHO05D014300 2.2e-06 55.5 61 55.7
Actinidia35363 Actinidia chinensis HOM05D001608 ORTHO05D014300 2.2e-06 55.5 61 55.7
Eucgr.F00722 Eucalyptus grandis HOM05D001608 ORTHO05D002070 2.2e-06 55.5 61 54.1
Manes.15G068100 Manihot esculenta HOM05D001608 ORTHO05D002070 2.2e-06 55.5 61 55.7
Phvul.006G046900 Phaseolus vulgaris HOM05D001608 ORTHO05D002070 2.2e-06 55.5 63 57.1
Potri.011G086800 Populus trichocarpa HOM05D001608 ORTHO05D002070 2.2e-06 55.5 61 55.7
Thecc.09G223800 Theobroma cacao HOM05D001608 ORTHO05D002070 2.2e-06 55.5 61 55.7
GSVIVG01037696001 Vitis vinifera HOM05D001608 ORTHO05D014300 2.2e-06 55.5 71 49.3
VMungo0540G2230 Vigna mungo HOM05D001608 ORTHO05D002070 2.9e-06 55.1 64 56.2
ClCG09G010980 Citrullus lanatus HOM05D001608 ORTHO05D002070 3.8e-06 54.7 61 55.7
MELO3C013140.2 Cucumis melo HOM05D001608 ORTHO05D002070 3.8e-06 54.7 61 55.7
CsaV3_7G022000 Cucumis sativus L. HOM05D001608 ORTHO05D002070 3.8e-06 54.7 61 55.7
Manes.03G133200 Manihot esculenta HOM05D001608 ORTHO05D002070 3.8e-06 54.7 61 59.0
Sed0022863 Sechium edule HOM05D001608 ORTHO05D002070 3.8e-06 54.7 61 54.1
Carub.0003s2076 Capsella rubella HOM05D001608 ORTHO05D002070 4.9e-06 54.3 61 54.1
Dinv22245 Davidia involucrata HOM05D001608 ORTHO05D002070 4.9e-06 54.3 61 55.7
Sp3g18820 Schrenkiella parvula HOM05D001608 ORTHO05D002070 4.9e-06 54.3 61 52.5
TWI38G0984 Tripterygium wilfordii HOM05D001608 ORTHO05D002070 4.9e-06 54.3 61 57.4
Aa31LG8G7610 Aethionema arabicum HOM05D001608 ORTHO05D002070 6.4e-06 53.9 61 52.5
AL3G34720 Arabidopsis lyrata HOM05D001608 ORTHO05D002070 6.4e-06 53.9 61 52.5
A05p27980 Brassica napus HOM05D001608 ORTHO05D002070 6.4e-06 53.9 61 57.4
BraA05t21681Z Brassica rapa HOM05D001608 ORTHO05D002070 6.4e-06 53.9 61 57.4
Cfa020305 Carpinus fangiana HOM05D001608 ORTHO05D002070 6.4e-06 53.9 61 54.1
SGA_v2.0_scaffold8G04343 Striga asiatica HOM05D001608 ORTHO05D002070 6.4e-06 53.9 61 55.7
AT3G20800 Arabidopsis thaliana HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 52.5
BcaB04g20627 Brassica carinata HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 57.4
BcaC09g49022 Brassica carinata HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 57.4
A01p34020 Brassica napus HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 57.4
C01p43420 Brassica napus HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 57.4
BraA01t03506Z Brassica rapa HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 57.4
CSS0031204 Camellia sinensis var. sinensis HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 54.1
Thhalv10021160m.g Eutrema salsugineum HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 52.5
Hund29390 Selenicereus undatus HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 54.1
Hund29391 Selenicereus undatus HOM05D001608 ORTHO05D002070 8.4e-06 53.5 61 54.1


User provided reference genes

Program Settings