Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 8.4e-48 193.4 97 100.0
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 9.2e-47 189.9 97 96.9
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.7e-46 188.3 97 95.9
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 5.8e-41 170.6 96 87.5
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 8.4e-40 166.8 100 82.0
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 3.2e-39 164.9 97 83.5
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 5.4e-39 164.1 100 80.0
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 5.4e-39 164.1 85 92.9
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 7.1e-39 163.7 86 90.7
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 1.2e-38 162.9 89 88.8
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 1.6e-38 162.5 86 89.5
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.6e-38 162.5 86 89.5
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 2.1e-38 162.2 83 91.6
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 3.5e-38 161.4 86 89.5
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 7.8e-38 160.2 86 88.4
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.3e-37 159.5 86 87.2
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.3e-37 159.5 89 85.4
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.3e-37 159.5 84 89.3
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 1.3e-37 159.5 86 87.2
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 2.3e-37 158.7 86 86.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 3.0e-37 158.3 87 86.2
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 3.9e-37 157.9 88 85.2
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 3.9e-37 157.9 88 85.2
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 3.9e-37 157.9 86 88.4
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.9e-37 157.9 88 88.6
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 3.9e-37 157.9 86 87.2
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 5.1e-37 157.5 88 83.0
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 6.6e-37 157.1 83 89.2
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.1e-36 156.4 85 87.1
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.1e-36 156.4 85 87.1
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.1e-36 156.4 83 89.2
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 1.1e-36 156.4 89 82.0
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.5e-36 156.0 83 85.5
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.5e-36 156.0 83 85.5
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 1.5e-36 156.0 84 89.3
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.5e-36 156.0 98 77.6
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 2.5e-36 155.2 84 85.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 2.5e-36 155.2 99 76.8
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 3.3e-36 154.8 86 84.9
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 3.3e-36 154.8 82 89.0
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 4.3e-36 154.5 86 84.9
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 4.3e-36 154.5 86 88.4
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 4.3e-36 154.5 85 85.9
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 7.3e-36 153.7 82 87.8
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 7.3e-36 153.7 91 84.6
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 7.3e-36 153.7 83 84.3
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 7.3e-36 153.7 88 86.4
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 7.3e-36 153.7 86 87.2
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 9.6e-36 153.3 86 83.7
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 9.6e-36 153.3 86 83.7
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 1.3e-35 152.9 86 83.7
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.3e-35 152.9 86 83.7
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-35 152.9 86 83.7
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-35 152.9 86 83.7
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.3e-35 152.9 86 83.7
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 1.3e-35 152.9 86 83.7
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.3e-35 152.9 82 86.6
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.3e-35 152.9 91 84.6
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.6e-35 152.5 86 83.7
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.6e-35 152.5 82 86.6
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.6e-35 152.5 86 82.6
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.6e-35 152.5 86 82.6
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.6e-35 152.5 86 83.7
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 2.1e-35 152.1 83 85.5
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 2.1e-35 152.1 83 85.5
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 2.8e-35 151.8 86 83.7
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.8e-35 151.8 84 83.3
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 3.6e-35 151.4 82 86.6
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 3.6e-35 151.4 82 86.6
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 4.8e-35 151.0 86 82.6
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 4.8e-35 151.0 86 82.6
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 4.8e-35 151.0 94 76.6
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 6.2e-35 150.6 82 85.4
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 8.1e-35 150.2 83 84.3
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 8.1e-35 150.2 83 84.3
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 8.1e-35 150.2 86 81.4
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 8.1e-35 150.2 86 81.4
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 8.1e-35 150.2 86 84.9
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.1e-34 149.8 86 83.7
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 1.8e-34 149.1 86 80.2
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 1.8e-34 149.1 98 75.5
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 4.0e-34 147.9 83 83.1
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 6.9e-34 147.1 82 82.9
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.2e-33 146.4 82 84.1
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.5e-33 146.0 84 78.6
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 2.0e-33 145.6 94 78.7
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 2.6e-33 145.2 86 81.4
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 5.8e-33 144.1 83 83.1
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 5.8e-33 144.1 82 82.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.7e-32 142.5 90 77.8
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.9e-31 139.0 73 87.7
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 2.4e-31 138.7 74 87.8
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.1e-30 135.6 96 75.0
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 4.6e-30 134.4 71 90.1
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 2.8e-27 125.2 89 64.0
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 3.7e-27 124.8 84 71.4
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 3.1e-26 121.7 80 68.8
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.7e-24 115.9 85 70.6
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 2.9e-24 115.2 83 66.3
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 3.2e-23 111.7 81 66.7
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 1.8e-21 105.9 79 64.6
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.8e-19 97.8 51 86.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.5e-17 92.8 108 50.9
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.9e-15 85.9 55 80.0
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 5.1e-13 77.8 49 77.6
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 6.1e-06 54.3 35 68.6


User provided reference genes

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