Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 7.1e-108 394.0 213 100.0
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 8.1e-88 327.4 215 86.5
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 8.4e-77 290.8 212 80.2
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 2.8e-64 249.2 177 78.5
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.4e-60 236.9 147 84.4
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 4.2e-60 235.3 144 86.1
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 2.4e-55 219.5 207 62.8
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 3.5e-54 215.7 140 78.6
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 3.5e-54 215.7 140 78.6
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 5.5e-52 208.4 148 72.3
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.2e-51 207.2 134 77.6
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.2e-51 207.2 201 60.7
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.6e-51 206.8 163 66.9
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.1e-51 206.5 149 71.1
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 2.1e-51 206.5 211 56.9
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 4.7e-51 205.3 198 61.1
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 6.1e-51 204.9 222 58.1
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 6.1e-51 204.9 179 62.6
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 6.1e-51 204.9 217 58.1
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 6.1e-51 204.9 202 60.4
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 6.1e-51 204.9 139 74.8
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 1.0e-50 204.1 141 74.5
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 1.0e-50 204.1 196 60.2
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.4e-50 203.8 141 73.8
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.8e-50 203.4 137 72.3
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 1.8e-50 203.4 210 57.1
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 5.2e-50 201.8 194 60.8
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.2e-50 201.8 180 62.8
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 8.8e-50 201.1 140 72.1
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.5e-49 200.3 138 72.5
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 3.3e-49 199.1 138 73.9
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 5.7e-49 198.4 197 58.9
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.3e-48 197.2 135 73.3
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.7e-48 196.8 131 75.6
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-47 194.1 208 56.7
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.8e-47 193.4 222 55.9
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 2.4e-47 193.0 173 61.8
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 2.4e-47 193.0 212 57.1
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 3.1e-47 192.6 208 56.2
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 3.1e-47 192.6 133 70.7
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 9.1e-47 191.0 207 56.0
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.6e-46 190.3 172 61.0
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 2.7e-46 189.5 220 54.1
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 5.9e-46 188.3 217 55.8
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 5.9e-46 188.3 145 69.0
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 5.9e-46 188.3 145 67.6
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 7.7e-46 188.0 144 67.4
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 7.7e-46 188.0 171 62.0
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.0e-45 187.6 142 67.6
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.0e-45 187.6 168 61.9
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 2.2e-45 186.4 172 58.1
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.2e-45 186.4 211 55.0
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 2.9e-45 186.0 135 71.1
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 2.9e-45 186.0 183 56.8
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 5.0e-45 185.3 191 51.8
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 5.0e-45 185.3 178 56.7
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 6.5e-45 184.9 199 56.3
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 6.5e-45 184.9 187 57.2
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.1e-44 184.1 190 56.3
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 1.5e-44 183.7 212 52.4
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.9e-44 183.3 195 55.4
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 1.9e-44 183.3 140 65.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.9e-44 183.3 137 68.6
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.9e-44 183.3 150 65.3
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 2.5e-44 183.0 139 65.5
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 4.2e-44 182.2 131 71.8
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 7.2e-44 181.4 171 61.4
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 1.2e-43 180.6 207 55.1
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 2.1e-43 179.9 194 54.6
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 2.1e-43 179.9 194 54.6
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 2.1e-43 179.9 194 54.6
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 2.1e-43 179.9 134 70.9
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 2.7e-43 179.5 133 68.4
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.7e-43 179.5 105 90.5
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.6e-43 179.1 173 59.5
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 4.7e-43 178.7 149 63.1
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.0e-42 177.6 140 62.9
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 1.0e-42 177.6 131 68.7
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 1.4e-42 177.2 140 62.9
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-42 176.8 140 62.1
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.8e-42 176.8 177 58.8
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 2.3e-42 176.4 140 62.1
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.0e-42 176.0 200 53.5
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 5.2e-42 175.3 161 59.6
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.2e-42 175.3 161 59.6
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.2e-42 175.3 139 63.3
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 6.8e-42 174.9 140 60.7
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 6.8e-42 174.9 166 56.0
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 6.8e-42 174.9 131 65.6
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.8e-42 174.9 140 62.1
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 8.8e-42 174.5 211 51.7
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.5e-41 173.7 211 54.0
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.6e-41 172.9 161 59.0
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 4.4e-41 172.2 131 67.2
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 9.8e-41 171.0 200 53.5
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.3e-40 170.6 139 64.0
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 2.8e-40 169.5 211 47.9
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.8e-39 166.8 130 67.7
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.1e-39 165.6 167 54.5
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 7.0e-39 164.9 204 49.0
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.9e-38 161.8 136 61.0
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.0e-37 161.0 126 64.3
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-37 160.6 161 57.1
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.0e-37 158.7 136 60.3
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.5e-37 157.9 211 51.2
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.9e-36 156.8 148 58.1
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 2.5e-36 156.4 131 61.1
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 4.2e-36 155.6 188 52.1
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 4.2e-36 155.6 148 57.4
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.6e-35 152.5 169 55.0
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 5.2e-34 148.7 197 47.2
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.5e-33 147.1 173 50.3
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 3.4e-33 146.0 145 56.6
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 3.5e-30 136.0 195 46.7
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 3.5e-30 136.0 195 46.7
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 4.5e-30 135.6 214 45.3
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 7.7e-30 134.8 214 44.9
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.0e-29 134.4 148 50.0
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.0e-29 134.4 148 50.0
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-29 133.7 205 44.9
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-29 133.7 205 44.9
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.7e-29 133.7 205 44.9
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 2.3e-29 133.3 214 44.9
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.5e-28 130.6 190 43.2
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 9.5e-28 127.9 148 48.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 1.6e-27 127.1 214 42.1
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.4e-26 124.0 135 54.1
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 5.2e-26 122.1 102 61.8
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 2.0e-25 120.2 173 46.2
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 4.4e-25 119.0 166 45.8
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 5.7e-25 118.6 162 46.3
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 1.8e-23 113.6 115 54.8
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 2.7e-22 109.8 140 54.3
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 4.6e-22 109.0 198 42.4
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 2.3e-21 106.7 216 41.2
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 3.9e-21 105.9 100 61.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.8e-18 97.1 68 72.1
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 3.4e-09 66.2 181 33.1
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 1.7e-08 63.9 69 55.1
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 6.0e-06 55.5 55 52.7


User provided reference genes

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