Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g035250 Solanum pennellii HOM05D022522 ORTHO05D015999 7.8e-118 427.2 220 100.0
Solyc09g092350.1 Solanum lycopersicum HOM05D022522 ORTHO05D015999 9.5e-116 420.2 220 98.2
PGSC0003DMG400020591 Solanum tuberosum HOM05D022522 ORTHO05D015999 2.7e-110 402.1 220 94.1
CAN.G1155.33 Capsicum annuum HOM05D022522 ORTHO05D015999 4.8e-99 364.8 221 84.2
Peaxi162Scf00047g00005 Petunia axillaris HOM05D022522 ORTHO05D015999 1.3e-83 313.5 237 73.4
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 4.0e-13 79.3 208 29.3
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 2.0e-09 67.0 113 36.3
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 6.0e-09 65.5 201 26.4
Migut.D00139 Erythranthe guttata HOM05D021624 ORTHO05D015999 1.0e-08 64.7 153 30.7
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 1.7e-08 63.9 212 27.4
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 2.3e-08 63.5 194 26.8
SGA_v2.0_scaffold1G00355 Striga asiatica HOM05D021624 ORTHO05D015999 5.0e-08 62.4 205 27.8
TWI59G1361 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.5e-07 60.8 162 29.6
AUR62025555 Chenopodium quinoa HOM05D003556 ORTHO05D003404 1.9e-07 60.5 174 29.3
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 3.3e-07 59.7 169 25.4
QL12p028082 Quercus lobata HOM05D003556 ORTHO05D003404 3.3e-07 59.7 154 29.9
Rhsim13G0008900 Rhododendron simsii HOM05D003556 ORTHO05D003404 5.6e-07 58.9 134 27.6
AUR62008689 Chenopodium quinoa HOM05D003556 ORTHO05D003404 7.3e-07 58.5 133 28.6
MSTRG.18138 Avicennia marina HOM05D021624 ORTHO05D015999 1.6e-06 57.4 168 28.6
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 1.6e-06 57.4 153 30.7
FAN24G2751 Fragaria x ananassa HOM05D003556 ORTHO05D003404 2.1e-06 57.0 114 31.6
CANSAT25G1336 Cannabis sativa HOM05D003556 ORTHO05D003404 2.8e-06 56.6 119 27.7
unitig_22.g5237 Utricularia gibba HOM05D021624 ORTHO05D015999 2.8e-06 56.6 186 25.8
FAN15G3222 Fragaria x ananassa HOM05D003556 ORTHO05D003404 3.6e-06 56.2 114 31.6
EL10Ac7g18176 Beta vulgaris HOM05D003556 ORTHO05D003404 4.7e-06 55.8 165 29.7
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 4.7e-06 55.8 116 27.6
Sc25g0000800 Simmondsia chinensis HOM05D003556 ORTHO05D003404 4.7e-06 55.8 161 28.6
RcHm_v2.0_Chr6g0294271 Rosa chinensis HOM05D003556 ORTHO05D003404 8.1e-06 55.1 123 28.5


User provided reference genes

Program Settings