Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 2.3e-60 235.3 115 100.0
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 4.7e-58 227.6 115 98.3
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.4e-33 146.4 160 56.2
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 3.5e-21 105.1 93 62.4
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 7.9e-21 104.0 90 66.7
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 5.3e-17 91.3 95 57.9
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 6.7e-12 74.3 69 65.2
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 4.3e-11 71.6 88 46.6
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 7.4e-11 70.9 73 54.8
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 7.4e-11 70.9 68 55.9
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 9.7e-11 70.5 66 62.1
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.7e-10 69.7 52 69.2
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 2.8e-10 68.9 50 72.0
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 2.8e-10 68.9 52 67.3
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 3.7e-10 68.6 85 54.1
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 3.7e-10 68.6 63 55.6
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 6.3e-10 67.8 81 48.1
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 6.3e-10 67.8 56 64.3
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 6.3e-10 67.8 112 41.1
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-09 67.0 69 56.5
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-09 67.0 52 65.4
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 1.4e-09 66.6 69 55.1
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.8e-09 66.2 66 59.1
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.8e-09 66.2 52 65.4
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.4e-09 65.9 69 50.7
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.4e-09 65.9 50 68.0
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 3.1e-09 65.5 97 43.3
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 3.1e-09 65.5 49 67.3
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 3.1e-09 65.5 52 65.4
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 4.1e-09 65.1 69 52.2
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 5.3e-09 64.7 47 68.1
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 1.2e-08 63.5 50 64.0
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.2e-08 63.5 57 61.4
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.5e-08 63.2 50 66.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.0e-08 62.8 50 66.0
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.0e-08 62.8 52 65.4
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 2.0e-08 62.8 50 62.0
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.0e-08 62.8 51 58.8
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 2.0e-08 62.8 52 59.6
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 3.4e-08 62.0 50 64.0
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 3.4e-08 62.0 48 70.8
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 4.5e-08 61.6 50 64.0
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 4.5e-08 61.6 71 52.1
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 4.5e-08 61.6 50 66.0
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 7.7e-08 60.8 70 45.7
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 7.7e-08 60.8 50 52.0
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.0e-07 60.5 50 60.0
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.0e-07 60.5 50 60.0
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.0e-07 60.5 48 68.8
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.7e-07 59.7 54 61.1
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.2e-07 59.3 65 50.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.2e-07 59.3 50 58.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 2.9e-07 58.9 51 60.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 3.8e-07 58.5 46 67.4
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 6.5e-07 57.8 48 60.4
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.9e-06 56.2 52 57.7
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.2e-06 54.3 52 55.8


User provided reference genes

Program Settings