Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.2e-129 466.5 228 100.0
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 6.0e-129 464.2 228 99.6
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 1.1e-127 459.9 228 98.2
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.0e-120 436.8 228 90.8
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.3e-120 436.4 228 91.7
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.7e-120 436.0 227 91.2
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.2e-108 396.7 226 85.4
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.8e-108 394.4 229 80.8
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.2e-107 392.5 229 80.3
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 1.2e-105 386.7 224 80.8
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 2.1e-105 386.0 228 80.7
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 2.1e-105 386.0 224 79.0
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.7e-105 385.6 229 79.9
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.5e-105 385.2 219 81.7
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.8e-105 384.0 225 79.6
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.7e-104 382.9 224 80.4
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 3.0e-104 382.1 223 80.3
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.5e-103 379.8 226 80.5
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.9e-103 379.4 226 79.2
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.6e-102 376.3 225 79.1
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.6e-102 376.3 225 78.2
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 4.8e-102 374.8 226 76.5
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.2e-102 374.4 226 76.5
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.4e-101 373.2 226 78.8
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.4e-101 373.2 229 76.0
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.8e-101 372.9 229 76.4
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 4.0e-101 371.7 225 76.0
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 6.9e-101 370.9 229 76.0
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 9.0e-101 370.5 215 78.6
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.2e-100 370.2 225 75.6
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.5e-100 369.8 225 74.2
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 2.6e-100 369.0 226 74.3
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 2.6e-100 369.0 214 79.4
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.4e-100 368.6 218 78.0
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 4.5e-100 368.2 221 76.9
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 7.6e-100 367.5 196 84.7
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.3e-99 366.7 227 74.9
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 2.9e-99 365.5 214 78.5
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 4.9e-99 364.8 214 78.0
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 8.4e-99 364.0 222 75.2
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.4e-98 363.2 219 75.8
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 3.2e-98 362.1 221 75.6
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 5.4e-98 361.3 214 76.2
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 7.1e-98 360.9 214 77.1
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.1e-98 360.9 221 75.1
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.6e-97 359.8 215 77.7
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.6e-97 359.8 231 73.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 2.7e-97 359.0 226 74.3
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.0e-97 357.8 238 72.3
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.9e-97 357.5 221 74.2
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.0e-96 357.1 215 76.3
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.3e-96 356.7 219 74.0
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 5.1e-96 354.8 223 73.1
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.7e-96 354.0 247 69.2
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 1.1e-95 353.6 221 73.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 5.6e-95 351.3 219 72.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.4e-95 350.9 220 71.4
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.6e-94 349.7 215 74.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 1.6e-94 349.7 218 74.8
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.8e-94 349.0 220 71.4
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 2.8e-94 349.0 220 73.2
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.8e-94 349.0 219 71.7
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 3.7e-94 348.6 220 70.9
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 3.7e-94 348.6 215 74.0
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 3.7e-94 348.6 220 70.5
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 4.8e-94 348.2 221 73.3
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 4.8e-94 348.2 217 74.7
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 8.1e-94 347.4 221 71.5
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.1e-93 345.5 220 69.5
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 4.0e-93 345.1 220 69.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.0e-93 345.1 220 69.5
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 4.0e-93 345.1 207 75.8
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 4.0e-93 345.1 311 57.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 6.9e-93 344.4 218 70.2
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 2.6e-92 342.4 228 69.7
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 3.4e-92 342.0 226 69.9
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 3.4e-92 342.0 217 72.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.5e-92 341.7 220 69.1
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.0e-91 340.5 231 68.8
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.3e-91 340.1 220 70.0
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.3e-91 340.1 215 73.0
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.7e-91 339.7 218 69.7
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.7e-91 339.7 218 69.7
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.7e-91 339.7 225 69.8
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 2.2e-91 339.3 221 68.8
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 2.2e-91 339.3 221 68.8
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 2.2e-91 339.3 196 78.1
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 2.9e-91 339.0 221 68.8
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 3.8e-91 338.6 221 68.3
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 4.9e-91 338.2 223 70.4
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.4e-90 336.7 221 67.9
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 4.2e-90 335.1 223 69.1
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 5.5e-90 334.7 270 62.2
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 7.1e-90 334.3 218 69.7
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.5e-89 332.0 216 70.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 6.2e-86 321.2 225 68.9
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.0e-83 313.9 226 63.3
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 6.1e-81 304.7 200 70.5
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 7.4e-79 297.7 208 67.3
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.6e-78 296.6 174 77.6
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.2e-78 296.2 165 81.8
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.8e-77 293.1 170 79.4
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.3e-70 270.4 228 60.1
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.1e-69 265.8 214 59.3
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.0e-67 260.8 216 58.8
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.2e-66 255.4 226 54.9
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 1.5e-55 220.3 139 74.8
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.2e-52 210.7 226 51.3
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.7e-46 190.3 101 84.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.3e-43 180.6 127 65.4
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.5e-43 177.9 212 44.8
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 8.5e-43 177.9 213 45.5
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 2.0e-39 166.8 208 45.7
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.0e-37 158.3 95 77.9
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.2e-36 157.5 103 69.9
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 6.6e-35 151.8 213 40.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.6e-35 151.4 95 75.8
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.6e-35 151.4 95 75.8
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 4.0e-32 142.5 110 65.5
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 8.9e-32 141.4 92 68.5
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.4e-29 133.3 93 72.0
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 7.8e-28 128.3 96 64.6
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 1.9e-26 123.6 130 51.5
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 1.9e-26 123.6 130 51.5
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.3e-24 116.7 84 65.5
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 4.4e-23 112.5 79 70.9
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.1e-21 107.8 188 38.3
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.4e-21 107.5 60 81.7
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.1e-17 93.6 52 80.8
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.9e-16 88.2 171 32.7
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 3.7e-14 82.8 48 77.1
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 2.1e-09 67.0 47 61.7


User provided reference genes

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