Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 9.6e-250 866.3 422 100.0
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 8.2e-249 863.2 422 99.5
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.4e-237 825.9 422 95.5
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.2e-214 748.8 423 85.6
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.5e-213 745.3 424 87.3
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 5.5e-213 744.2 423 85.3
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 7.0e-192 674.1 427 78.5
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.9e-165 586.3 411 68.1
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 3.0e-158 562.4 419 65.6
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 3.3e-157 558.9 422 65.2
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.1e-156 556.2 425 63.1
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 3.6e-156 555.4 435 63.2
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 4.8e-156 555.1 416 65.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.4e-155 553.5 426 63.6
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.8e-155 553.1 422 63.3
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 6.9e-155 551.2 415 63.4
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 9.0e-155 550.8 422 63.0
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.3e-153 547.0 427 62.3
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.2e-153 546.2 417 64.7
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 6.4e-153 544.7 421 62.5
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 8.4e-153 544.3 421 65.3
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 3.2e-152 542.3 421 60.6
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 3.2e-152 542.3 422 64.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 7.1e-152 541.2 412 62.4
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 9.3e-152 540.8 417 65.5
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.2e-151 540.4 417 63.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 2.1e-151 539.7 419 63.2
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 4.6e-151 538.5 424 63.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.3e-150 537.0 414 62.6
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 2.3e-150 536.2 421 60.3
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.9e-149 533.1 418 64.4
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 5.6e-149 531.6 421 62.5
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.3e-148 530.4 422 61.1
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 4.8e-148 528.5 409 62.3
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 6.2e-148 528.1 417 63.5
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 6.2e-148 528.1 417 63.5
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 8.1e-148 527.7 429 61.1
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.1e-147 527.3 422 60.4
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 9.0e-147 524.2 418 62.4
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 9.0e-147 524.2 423 60.3
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 3.8e-145 518.8 417 62.6
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.4e-144 516.9 415 59.8
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.9e-144 516.5 377 66.0
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 2.4e-144 516.2 414 62.1
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 4.2e-144 515.4 419 59.4
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 7.1e-144 514.6 418 60.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 9.3e-144 514.2 427 60.7
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.6e-143 513.5 419 59.2
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 3.5e-143 512.3 434 61.8
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.5e-143 512.3 408 60.0
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 4.6e-143 511.9 428 61.4
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 1.0e-142 510.8 509 53.4
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.3e-142 509.6 421 59.9
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 2.3e-142 509.6 428 61.2
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 4.3e-141 505.4 415 58.8
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 3.7e-140 502.3 409 59.9
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 4.8e-140 501.9 409 60.4
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 8.2e-140 501.1 431 58.2
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 9.0e-139 497.7 409 59.7
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 2.6e-138 496.1 431 57.1
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.9e-136 490.0 409 58.7
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 9.3e-136 487.6 409 58.7
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 9.3e-136 487.6 417 58.5
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 2.7e-135 486.1 392 62.8
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 3.5e-135 485.7 438 56.6
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 7.9e-135 484.6 374 62.8
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 5.7e-133 478.4 420 57.4
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.2e-132 476.5 414 56.0
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 1.1e-131 474.2 641 41.8
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 2.6e-130 469.5 378 60.3
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.3e-129 467.2 353 64.0
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 6.5e-129 464.9 411 55.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.4e-128 463.8 418 54.1
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.2e-128 462.6 418 54.5
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 4.2e-128 462.2 405 55.8
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.2e-127 460.7 417 55.9
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 7.9e-127 458.0 405 55.8
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.4e-126 457.2 401 56.1
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 1.1e-125 454.1 416 54.8
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.9e-125 453.4 366 60.1
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 4.3e-125 452.2 355 63.1
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 5.7e-125 451.8 401 56.1
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 2.8e-124 449.5 426 54.5
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 2.4e-123 446.4 352 61.1
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 4.1e-123 445.7 404 54.7
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.1e-123 445.7 411 54.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 9.1e-123 444.5 405 55.1
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 9.1e-123 444.5 405 55.1
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 2.0e-122 443.4 405 54.6
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.9e-121 439.5 396 54.3
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 7.4e-117 424.9 434 52.1
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 2.3e-110 403.3 410 49.5
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.7e-105 387.1 418 47.6
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.0e-102 376.3 303 59.7
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 5.2e-102 375.6 306 62.1
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 8.6e-89 331.6 294 56.8
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 6.0e-74 282.3 488 35.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.5e-69 267.7 232 58.6
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 5.8e-69 265.8 452 37.6
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 4.4e-61 239.6 210 53.3
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.2e-58 231.5 276 47.1
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 3.6e-55 219.9 189 58.2
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 3.1e-54 216.9 206 51.0
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 3.0e-49 200.3 185 51.9
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 8.4e-44 182.2 178 48.9
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.3e-40 170.2 137 62.8
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 2.4e-38 164.1 246 40.7
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 4.5e-37 159.8 113 67.3
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 7.6e-37 159.1 123 64.2
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.4e-22 111.7 110 50.9
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 2.8e-15 87.4 101 45.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 8.5e-12 75.9 104 35.6
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 4.6e-10 70.1 125 39.2
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 5.1e-09 66.6 61 59.0
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 2.5e-08 64.3 197 26.4
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 3.3e-08 63.9 50 62.0
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 9.7e-08 62.4 52 55.8
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 1.1e-06 58.9 224 26.3


User provided reference genes

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