Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g033460 Solanum pennellii HOM05D001861 ORTHO05D001868 2.7e-113 412.5 299 100.0
PGSC0003DMG400017200 Solanum tuberosum HOM05D001861 ORTHO05D001868 1.8e-96 356.7 307 86.0
CAN.G220.91 Capsicum annuum HOM05D001861 ORTHO05D001868 2.5e-74 283.1 299 67.9
Nitab4.5_0002709g0080 Nicotiana tabacum HOM05D001861 ORTHO05D001868 1.6e-60 237.3 312 55.4
Nitab4.5_0001051g0050 Nicotiana tabacum HOM05D001861 ORTHO05D001868 1.7e-59 233.8 312 51.9
Peaxi162Scf00033g02833 Petunia axillaris HOM05D001861 ORTHO05D001868 1.5e-47 194.1 300 43.0
Cc03_g06000 Coffea canephora HOM05D001861 ORTHO05D001868 1.4e-21 107.8 340 32.1
Hma1.2p1_0112F.1_g054560 Hydrangea macrophylla HOM05D001861 ORTHO05D001868 1.9e-18 97.4 317 39.1
Dinv27095 Davidia involucrata HOM05D001861 ORTHO05D001868 4.3e-18 96.3 347 33.1
Dinv29817 Davidia involucrata HOM05D001861 ORTHO05D001868 2.1e-17 94.0 315 33.7
Haze_11444 Corylus avellana HOM05D001861 ORTHO05D001868 1.8e-16 90.9 280 33.9
Oeu002285.1 Olea europaea HOM05D001861 ORTHO05D001868 4.4e-15 86.3 298 28.5
Rhsim04G0173700 Rhododendron simsii HOM05D001861 ORTHO05D001868 5.8e-15 85.9 298 31.5
Cfa014768 Carpinus fangiana HOM05D001861 ORTHO05D001868 5.4e-13 79.3 318 34.9
vmacro08539 Vaccinium macrocarpon HOM05D001861 ORTHO05D001868 2.7e-12 77.0 299 29.1
Atru.chr4.1932 Acer truncatum HOM05D001861 ORTHO05D001868 4.6e-12 76.3 343 30.0
MELO3C023034.2 Cucumis melo HOM05D001861 ORTHO05D001868 7.8e-12 75.5 288 33.3
Prupe.1G046000 Prunus persica HOM05D001861 ORTHO05D001868 7.8e-12 75.5 292 35.6
TWI09G0555 Tripterygium wilfordii HOM05D001861 ORTHO05D001868 7.8e-12 75.5 298 30.9
Gohir.A10G108300 Gossypium hirsutum HOM05D001861 ORTHO05D001868 1.3e-11 74.7 303 29.7
Gohir.D10G159500 Gossypium hirsutum HOM05D001861 ORTHO05D001868 1.3e-11 74.7 303 30.0
Gorai.011G179100 Gossypium raimondii HOM05D001861 ORTHO05D001868 1.3e-11 74.7 303 30.0
CSS0000256 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 1.7e-11 74.3 322 32.3
CsaV3_2G012510 Cucumis sativus L. HOM05D001861 ORTHO05D001868 1.7e-11 74.3 287 32.1
TAR365G0301 Trochodendron aralioides HOM05D001861 ORTHO05D001868 1.7e-11 74.3 331 32.3
Potri.008G170600 Populus trichocarpa HOM05D001861 ORTHO05D001868 3.0e-11 73.6 304 32.6
COL.COLO4_15945 Corchorus olitorius HOM05D001861 ORTHO05D001868 8.7e-11 72.0 330 26.4
QL06p020698 Quercus lobata HOM05D001861 ORTHO05D001868 8.7e-11 72.0 310 29.4
MD13G1219300 Malus domestica HOM05D001861 ORTHO05D001868 1.1e-10 71.6 294 30.6
GSVIVG01027898001 Vitis vinifera HOM05D001861 ORTHO05D001868 1.1e-10 71.6 89 48.3
SGA_v2.0_scaffold67G22706 Striga asiatica HOM05D001861 ORTHO05D001868 1.5e-10 71.2 292 29.8
TAR633G1161 Trochodendron aralioides HOM05D001861 ORTHO05D001868 1.5e-10 71.2 327 32.4
TAR362G1165 Trochodendron aralioides HOM05D001861 ORTHO05D001868 1.9e-10 70.9 345 31.0
Duzib138G0460 Durio zibethinus HOM05D001861 ORTHO05D001868 2.5e-10 70.5 87 47.1
Duzib151G0538 Durio zibethinus HOM05D001861 ORTHO05D001868 2.5e-10 70.5 327 31.5
Potri.010G067300 Populus trichocarpa HOM05D001861 ORTHO05D001868 3.3e-10 70.1 307 32.9
CiPaw.01G179500 Carya illinoinensis HOM05D001861 ORTHO05D001868 4.3e-10 69.7 339 28.0
MD16G1224700 Malus domestica HOM05D001861 ORTHO05D001868 4.3e-10 69.7 278 35.3
MSTRG.9871 Avicennia marina HOM05D001861 ORTHO05D001868 5.6e-10 69.3 319 29.8
CiPaw.03G268800 Carya illinoinensis HOM05D001861 ORTHO05D001868 5.6e-10 69.3 85 49.4
Manes.03G160500 Manihot esculenta HOM05D001861 ORTHO05D001868 5.6e-10 69.3 356 30.3
Manes.15G044200 Manihot esculenta HOM05D001861 ORTHO05D001868 5.6e-10 69.3 323 29.1
Prupe.8G218000 Prunus persica HOM05D001861 ORTHO05D001868 5.6e-10 69.3 305 31.1
COL.COLO4_08951 Corchorus olitorius HOM05D001861 ORTHO05D001868 7.3e-10 68.9 99 42.4
Sed0022466 Sechium edule HOM05D001861 ORTHO05D001868 7.3e-10 68.9 89 42.7
Atru.chr5.1809 Acer truncatum HOM05D001861 ORTHO05D001868 1.6e-09 67.8 306 27.5
MD10G1178600 Malus domestica HOM05D001861 ORTHO05D001868 1.6e-09 67.8 86 47.7
Manes.13G037900 Manihot esculenta HOM05D001861 ORTHO05D001868 1.6e-09 67.8 308 29.9
Actinidia20830 Actinidia chinensis HOM05D001861 ORTHO05D001868 2.1e-09 67.4 83 48.2
Ciclev10020148m.g Citrus clementina HOM05D001861 ORTHO05D001868 2.1e-09 67.4 88 45.5
CSS0015268 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 2.8e-09 67.0 97 42.3
CANSAT78G0004 Cannabis sativa HOM05D001861 ORTHO05D001868 2.8e-09 67.0 294 31.0
Sabra08G0130400 Salix brachista HOM05D001861 ORTHO05D001868 3.6e-09 66.6 320 27.8
Ciclev10005356m.g Citrus clementina HOM05D001861 ORTHO05D001868 4.8e-09 66.2 337 30.0
Hma1.2p1_0273F.1_g109330 Hydrangea macrophylla HOM05D001861 ORTHO05D001868 4.8e-09 66.2 294 28.6
Thecc.04G261800 Theobroma cacao HOM05D001861 ORTHO05D001868 4.8e-09 66.2 329 29.5
CSS0030260 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 1.8e-08 64.3 78 47.4
Sabra10G0040100 Salix brachista HOM05D001861 ORTHO05D001868 1.8e-08 64.3 115 37.4
vmacro02703 Vaccinium macrocarpon HOM05D001861 ORTHO05D001868 1.8e-08 64.3 85 47.1
GSVIVG01028395001 Vitis vinifera HOM05D001861 ORTHO05D001868 1.8e-08 64.3 86 46.5
RcHm_v2.0_Chr4g0394781 Rosa chinensis HOM05D001861 ORTHO05D001868 2.4e-08 63.9 95 43.2
Eucgr.A01357 Eucalyptus grandis HOM05D001861 ORTHO05D001868 3.1e-08 63.5 119 37.8
Gohir.A11G132600 Gossypium hirsutum HOM05D001861 ORTHO05D001868 3.1e-08 63.5 86 44.2
Gorai.007G148800 Gossypium raimondii HOM05D001861 ORTHO05D001868 3.1e-08 63.5 86 44.2
Hund18272 Selenicereus undatus HOM05D001861 ORTHO05D001868 4.0e-08 63.2 97 42.3
QL09p040988 Quercus lobata HOM05D001861 ORTHO05D001868 5.3e-08 62.8 323 28.8
Thecc.01G252900 Theobroma cacao HOM05D001861 ORTHO05D001868 5.3e-08 62.8 86 47.7
Phvul.001G163600 Phaseolus vulgaris HOM05D001861 ORTHO05D001868 6.9e-08 62.4 81 46.9
Potri.002G258501 Populus trichocarpa HOM05D001861 ORTHO05D001868 6.9e-08 62.4 97 42.3
MSTRG.21470 Avicennia marina HOM05D001861 ORTHO05D001868 1.2e-07 61.6 122 32.8
Gohir.D11G138700 Gossypium hirsutum HOM05D001861 ORTHO05D001868 1.2e-07 61.6 125 36.8
Oeu035746.1 Olea europaea HOM05D001861 ORTHO05D001868 1.2e-07 61.6 86 45.3
VMungo1383G3726 Vigna mungo HOM05D001861 ORTHO05D001868 1.2e-07 61.6 84 42.9
CANSAT01G1959 Cannabis sativa HOM05D001861 ORTHO05D001868 1.5e-07 61.2 115 39.1
MD05G1191900 Malus domestica HOM05D001861 ORTHO05D001868 1.5e-07 61.2 312 30.4
arahy.Tifrunner.gnm1.ann1.MP36QT Arachis hypogaea HOM05D001861 ORTHO05D001868 2.0e-07 60.8 111 38.7
CiPaw.04G189000 Carya illinoinensis HOM05D001861 ORTHO05D001868 2.0e-07 60.8 95 45.3
Lj2A1144T90 Lonicera japonica HOM05D001861 ORTHO05D001868 2.0e-07 60.8 103 40.8
Rhsim13G0039200 Rhododendron simsii HOM05D001861 ORTHO05D001868 2.0e-07 60.8 85 45.9
Actinidia37543 Actinidia chinensis HOM05D001861 ORTHO05D001868 2.6e-07 60.5 297 25.6
CSS0024374 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 2.6e-07 60.5 78 46.2
arahy.Tifrunner.gnm1.ann1.LSA08Y Arachis hypogaea HOM05D001861 ORTHO05D001868 3.4e-07 60.1 124 38.7
FAN15G3358 Fragaria x ananassa HOM05D001861 ORTHO05D001868 3.4e-07 60.1 89 43.8
TWI12G0903 Tripterygium wilfordii HOM05D001861 ORTHO05D001868 3.4e-07 60.1 83 47.0
Duzib052G1222 Durio zibethinus HOM05D001861 ORTHO05D001868 4.4e-07 59.7 87 43.7
DCAR_018512 Daucus carota HOM05D001861 ORTHO05D001868 5.8e-07 59.3 85 45.9
Eucgr.H02966 Eucalyptus grandis HOM05D001861 ORTHO05D001868 5.8e-07 59.3 81 42.0
FAN27G2922 Fragaria x ananassa HOM05D001861 ORTHO05D001868 5.8e-07 59.3 89 42.7
Nn1g02913 Nelumbo nucifera HOM05D001861 ORTHO05D001868 7.6e-07 58.9 340 35.3
Sed0001818 Sechium edule HOM05D001861 ORTHO05D001868 7.6e-07 58.9 111 37.8
Sc05g0003130 Simmondsia chinensis HOM05D001861 ORTHO05D001868 7.6e-07 58.9 83 43.4
Actinidia30135 Actinidia chinensis HOM05D001861 ORTHO05D001868 9.9e-07 58.5 301 27.9
AUR62008778 Chenopodium quinoa HOM05D001861 ORTHO05D001868 9.9e-07 58.5 93 41.9
Thhalv10007735m.g Eutrema salsugineum HOM05D001861 ORTHO05D001868 9.9e-07 58.5 137 32.8
FAN20G2565 Fragaria x ananassa HOM05D001861 ORTHO05D001868 9.9e-07 58.5 89 42.7
Medtr1g073670 Medicago truncatula HOM05D001861 ORTHO05D001868 9.9e-07 58.5 289 30.1
arahy.Tifrunner.gnm1.ann1.Z5JC91 Arachis hypogaea HOM05D001861 ORTHO05D001868 1.3e-06 58.2 77 41.6
Sc20g0000700 Simmondsia chinensis HOM05D001861 ORTHO05D001868 1.3e-06 58.2 130 33.8
Actinidia09524 Actinidia chinensis HOM05D001861 ORTHO05D001868 1.7e-06 57.8 103 36.9
AT5G44040 Arabidopsis thaliana HOM05D001861 ORTHO05D001868 1.7e-06 57.8 137 35.8
EL10Ac4g08993 Beta vulgaris HOM05D001861 ORTHO05D001868 1.7e-06 57.8 102 42.2
Cc01_g17950 Coffea canephora HOM05D001861 ORTHO05D001868 1.7e-06 57.8 109 38.5
Duzib133G0752 Durio zibethinus HOM05D001861 ORTHO05D001868 1.7e-06 57.8 312 30.4
Psat6g117160 Pisum sativum HOM05D001861 ORTHO05D001868 1.7e-06 57.8 122 35.2
TWI75G1188 Tripterygium wilfordii HOM05D001861 ORTHO05D001868 1.7e-06 57.8 117 37.6
BcaC06g31659 Brassica carinata HOM05D001861 ORTHO05D001868 2.2e-06 57.4 120 36.7
Ca_09656_v3 Cicer arietinum L. HOM05D001861 ORTHO05D001868 2.2e-06 57.4 85 38.8
FvH4_2g20800 Fragaria vesca HOM05D001861 ORTHO05D001868 2.2e-06 57.4 89 41.6
Glyma.19G167200 Glycine max HOM05D001861 ORTHO05D001868 2.2e-06 57.4 326 25.2
Lalb_Chr02g0152681 Lupinus albus HOM05D001861 ORTHO05D001868 2.2e-06 57.4 88 42.0
Lalb_Chr21g0314071 Lupinus albus HOM05D001861 ORTHO05D001868 2.2e-06 57.4 115 35.7
Nn3g19746 Nelumbo nucifera HOM05D001861 ORTHO05D001868 2.2e-06 57.4 85 41.2
Nitab4.5_0003295g0140 Nicotiana tabacum HOM05D001861 ORTHO05D001868 2.2e-06 57.4 88 42.0
Peaxi162Scf00415g00518 Petunia axillaris HOM05D001861 ORTHO05D001868 2.2e-06 57.4 90 43.3
RcHm_v2.0_Chr6g0287181 Rosa chinensis HOM05D001861 ORTHO05D001868 2.2e-06 57.4 130 35.4
Psat6g061640 Pisum sativum HOM05D001861 ORTHO05D001868 2.9e-06 57.0 85 41.2
SGA_v2.0_scaffold1G00642 Striga asiatica HOM05D001861 ORTHO05D001868 2.9e-06 57.0 83 37.3
AUR62025460 Chenopodium quinoa HOM05D001861 ORTHO05D001868 3.8e-06 56.6 81 40.7
Haze_24681 Corylus avellana HOM05D001861 ORTHO05D001868 3.8e-06 56.6 297 25.6
FAN12G4349 Fragaria x ananassa HOM05D001861 ORTHO05D001868 3.8e-06 56.6 92 43.5
Nitab4.5_0002389g0030 Nicotiana tabacum HOM05D001861 ORTHO05D001868 3.8e-06 56.6 79 46.8
SalBow4G2393 Salvia bowleyana HOM05D001861 ORTHO05D001868 3.8e-06 56.6 129 31.8
FAN22G2180 Fragaria x ananassa HOM05D001861 ORTHO05D001868 4.9e-06 56.2 91 41.8
Cpa.g.sc165.47 Carica papaya HOM05D001861 ORTHO05D001868 6.4e-06 55.8 87 46.0
Lj5g0002325 Lotus japonicus HOM05D001861 ORTHO05D001868 6.4e-06 55.8 75 45.3
Ah.15g092690 Amaranthus hybridus HOM05D001861 ORTHO05D001868 8.4e-06 55.5 83 44.6
Glyma.10G039500 Glycine max HOM05D001861 ORTHO05D001868 8.4e-06 55.5 83 45.8
TPR.G5651 Trifolium pratense HOM05D001861 ORTHO05D001868 8.4e-06 55.5 301 24.9
GSVIVG01023442001 Vitis vinifera HOM05D001861 ORTHO05D001868 8.4e-06 55.5 87 43.7


User provided reference genes

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