Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 2.0e-133 479.2 251 100.0
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.1e-131 473.4 252 99.2
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 3.2e-131 471.9 252 98.8
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 6.6e-129 464.2 252 96.4
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.0e-126 456.8 252 95.2
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.3e-126 455.7 252 95.2
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.5e-125 453.0 252 94.0
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 4.9e-116 421.4 254 87.0
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 86.5
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 8.3e-116 420.6 252 86.1
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 8.3e-116 420.6 252 86.1
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 8.3e-116 420.6 252 86.5
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 87.3
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 86.1
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 84.5
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 85.7
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 7.1e-115 417.5 252 85.3
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 7.1e-115 417.5 252 86.1
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.6e-114 416.4 254 85.8
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.6e-114 416.4 250 84.4
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 84.9
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.1
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.9
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.7e-113 412.9 253 85.0
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 1.7e-113 412.9 251 83.7
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 85.7
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 85.7
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 83.3
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 84.9
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 83.7
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 3.9e-113 411.8 250 83.6
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 84.9
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 85.3
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 85.3
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 6.6e-113 411.0 253 85.8
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 84.9
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 84.1
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 8.6e-113 410.6 252 84.1
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 8.6e-113 410.6 252 84.1
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 84.1
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 83.3
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 84.5
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 83.3
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 82.1
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 84.1
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 85.7
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 84.1
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 83.7
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 84.1
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 9.5e-112 407.1 252 84.1
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 9.5e-112 407.1 252 84.1
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.2e-111 406.8 248 85.1
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 82.9
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 2.1e-111 406.0 252 84.1
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 82.5
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 83.7
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 83.7
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 82.9
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 6.2e-111 404.4 252 82.9
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 8.1e-111 404.1 252 82.1
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 82.5
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 81.0
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.6e-109 399.1 252 80.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 81.3
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 82.1
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 82.1
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 81.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 9.9e-109 397.1 281 76.2
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 9.9e-109 397.1 256 80.9
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 9.9e-109 397.1 253 80.2
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 80.2
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 81.0
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.7e-108 396.4 256 80.9
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 2.2e-108 396.0 252 82.1
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 2.9e-108 395.6 250 82.0
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 2.9e-108 395.6 254 81.9
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.9e-108 395.6 283 75.3
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 3.7e-108 395.2 252 79.8
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 6.4e-108 394.4 249 82.7
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 6.4e-108 394.4 249 82.7
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 8.3e-108 394.0 252 82.5
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.9e-107 392.9 252 80.6
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 7.1e-107 391.0 260 78.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 7.1e-107 391.0 283 74.2
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 9.2e-107 390.6 249 82.3
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.7e-105 386.3 259 79.5
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 2.3e-105 386.0 239 83.7
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 3.3e-104 382.1 252 79.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 2.0e-101 372.9 256 75.0
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 9.9e-101 370.5 255 75.3
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.1e-96 357.1 272 73.2
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.1e-96 357.1 252 73.0
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.6e-95 353.2 221 83.3
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 1.1e-94 350.5 267 68.2
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 2.4e-94 349.4 251 71.3
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 2.0e-93 346.3 252 71.4
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 9.9e-93 344.0 254 70.1
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 1.2e-90 337.0 252 73.0
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.9e-88 329.7 255 70.6
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 3.2e-83 312.4 274 66.8
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 7.9e-82 307.8 190 83.7
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.5e-80 302.8 190 81.6
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 1.4e-78 297.0 251 62.2
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.9e-78 294.7 176 85.2
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 9.0e-78 294.3 177 85.3
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 5.8e-77 291.6 229 68.1
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 9.3e-75 284.3 177 83.1
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 6.7e-73 278.1 255 57.6
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 1.6e-71 273.5 280 54.3
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.5e-64 250.4 251 56.2
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 3.1e-62 242.7 253 53.0
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 4.5e-61 238.8 145 82.8
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 8.5e-60 234.6 146 81.5
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 5.7e-56 221.9 254 48.4
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.0e-49 201.1 123 82.9
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 1.8e-33 147.1 86 87.2
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 3.0e-33 146.4 96 74.0
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 9.8e-32 141.4 91 76.9
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 3.2e-27 126.3 83 78.3
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.0e-17 93.2 63 68.3
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.0e-12 78.2 48 81.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 5.2e-09 65.9 49 65.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.7e-07 60.8 34 79.4


User provided reference genes

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