Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 0.0e+00 1374.0 713 100.0
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 0.0e+00 1288.5 713 93.7
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 0.0e+00 1232.2 715 89.5
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 4.2e-213 745.3 739 60.9
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 4.5e-207 725.3 738 60.3
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 2.9e-174 616.3 602 61.6
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 4.6e-34 150.6 799 26.3
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.7e-28 132.1 734 25.9
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 3.7e-28 131.0 829 26.4
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 7.1e-27 126.7 763 28.0
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 8.6e-25 119.8 352 29.8
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 5.6e-24 117.1 135 48.9
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 2.1e-23 115.2 803 25.5
Nitab4.5_0002118g0030 Nicotiana tabacum HOM05D014400 ORTHO05D010081 2.6e-21 108.2 130 50.8
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 1.7e-20 105.5 341 31.7
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 2.9e-20 104.8 151 44.4
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 3.8e-20 104.4 798 23.4
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 4.1e-19 100.9 478 26.2
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 1.2e-18 99.4 543 24.5
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 3.5e-18 97.8 560 25.5
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.7e-17 95.5 173 42.2
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.7e-17 95.5 815 24.5
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 3.3e-16 91.3 179 35.2
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 4.3e-16 90.9 426 27.2
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 2.1e-15 88.6 598 24.2
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 3.6e-15 87.8 255 33.3
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 6.2e-15 87.0 589 24.3
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 1.4e-14 85.9 847 23.8
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 6.9e-14 83.6 793 24.1
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 9.0e-14 83.2 506 27.7
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 3.4e-13 81.3 181 37.0
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 3.4e-13 81.3 167 33.5
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.3e-12 79.3 802 24.3
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 3.8e-12 77.8 153 35.3
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 8.4e-12 76.6 772 22.9
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 8.4e-12 76.6 767 23.3
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 1.1e-11 76.3 260 29.6
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 1.9e-11 75.5 471 23.4
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 4.2e-11 74.3 235 34.9
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.2e-11 74.3 779 23.2
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.1e-11 73.6 799 21.9
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.6e-10 72.4 490 26.3
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.5e-10 71.2 768 22.7
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.5e-10 71.2 768 22.7
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 1.9e-08 65.5 381 26.5
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 3.3e-08 64.7 169 30.8
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 9.6e-08 63.2 700 22.1
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 2.1e-07 62.0 113 36.3
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 3.1e-06 58.2 679 23.1
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 4.0e-06 57.8 85 48.2
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 4.0e-06 57.8 745 22.0
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 6.9e-06 57.0 749 22.0


User provided reference genes

Program Settings