Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g031530 Solanum pennellii HOM05D000141 ORTHO05D043448 1.9e-44 182.2 94 100.0
PGSC0003DMG401007845 Solanum tuberosum HOM05D000141 ORTHO05D001311 1.6e-40 169.1 91 96.7
Solyc12g011290.2 Solanum lycopersicum HOM05D000141 ORTHO05D001311 3.6e-40 167.9 91 95.6
Sopen12g006620 Solanum pennellii HOM05D000141 ORTHO05D001311 2.2e-37 158.7 88 94.3
CAN.G164.4 Capsicum annuum HOM05D000141 ORTHO05D001311 1.3e-32 142.9 92 83.7
Nitab4.5_0000505g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001311 2.0e-30 135.6 91 76.9
Nitab4.5_0000639g0260 Nicotiana tabacum HOM05D000141 ORTHO05D001311 3.4e-30 134.8 91 76.9
CAN.G82.22 Capsicum annuum HOM05D000141 ORTHO05D043448 5.5e-28 127.5 89 77.5
Cc05_g10030 Coffea canephora HOM05D000141 ORTHO05D001311 8.2e-16 87.0 91 51.6
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 1.5e-14 82.8 92 54.3
CSS0044535 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 5.9e-14 80.9 94 52.1
Actinidia20594 Actinidia chinensis HOM05D000141 ORTHO05D001311 1.0e-13 80.1 94 46.8
Cfa019444 Carpinus fangiana HOM05D000141 ORTHO05D001311 1.0e-13 80.1 92 48.9
ClCG07G010630 Citrullus lanatus HOM05D000141 ORTHO05D001311 1.3e-13 79.7 92 45.7
Haze_08513 Corylus avellana HOM05D000141 ORTHO05D001311 1.3e-13 79.7 92 48.9
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 2.2e-13 79.0 95 49.5
Dinv26638 Davidia involucrata HOM05D000141 ORTHO05D001311 3.8e-13 78.2 92 55.4
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 5.0e-13 77.8 94 48.9
MSTRG.14999 Avicennia marina HOM05D000141 ORTHO05D001311 6.5e-13 77.4 91 49.5
Rhsim06G0183600 Rhododendron simsii HOM05D000141 ORTHO05D001311 6.5e-13 77.4 94 47.9
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 1.1e-12 76.6 92 47.8
Peaxi162Scf00000g00587 Petunia axillaris HOM05D000141 ORTHO05D001311 1.1e-12 76.6 119 47.9
MELO3C016173.2 Cucumis melo HOM05D000141 ORTHO05D001311 1.4e-12 76.3 91 46.2
CANSAT56G1181 Cannabis sativa HOM05D000141 ORTHO05D001311 1.9e-12 75.9 93 44.1
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 1.9e-12 75.9 93 47.3
Prupe.4G144400 Prunus persica HOM05D000141 ORTHO05D001311 2.5e-12 75.5 93 48.4
Eucgr.F03192 Eucalyptus grandis HOM05D000141 ORTHO05D001311 3.2e-12 75.1 91 45.1
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 4.2e-12 74.7 93 43.0
FAN21G3407 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.2e-12 74.7 95 47.4
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 5.5e-12 74.3 95 47.4
Actinidia12332 Actinidia chinensis HOM05D000141 ORTHO05D001311 1.2e-11 73.2 93 45.2
CiPaw.12G006000 Carya illinoinensis HOM05D000141 ORTHO05D001311 1.2e-11 73.2 92 43.5
FAN25G3242 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.2e-11 73.2 95 46.3
Sed0016222 Sechium edule HOM05D000141 ORTHO05D001311 1.6e-11 72.8 91 47.3
Potri.011G140000 Populus trichocarpa HOM05D000141 ORTHO05D001311 2.1e-11 72.4 91 46.2
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 4.6e-11 71.2 95 46.3
CsaV3_4G007670 Cucumis sativus L. HOM05D000141 ORTHO05D001311 2.3e-10 68.9 91 42.9
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 2.3e-10 68.9 95 45.3
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 2.3e-10 68.9 91 45.1
SalBow8G4088 Salvia bowleyana HOM05D000141 ORTHO05D001311 5.1e-10 67.8 91 48.4
Sabra11G0126100 Salix brachista HOM05D000141 ORTHO05D001311 8.8e-10 67.0 92 44.6
TAR512G0002 Trochodendron aralioides HOM05D000141 ORTHO05D001311 1.5e-09 66.2 91 47.3
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 2.0e-09 65.9 91 46.2
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 2.0e-09 65.9 91 46.2
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 2.5e-09 65.5 91 46.2
Cpa.g.sc229.5 Carica papaya HOM05D000141 ORTHO05D001311 9.7e-09 63.5 92 42.4
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 2.8e-08 62.0 93 39.8
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 2.8e-08 62.0 93 39.8
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 2.8e-08 62.0 92 46.7
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 2.8e-08 62.0 91 35.2
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 2.8e-08 62.0 91 35.2
Lj3g0018650 Lotus japonicus HOM05D000141 ORTHO05D001311 2.8e-08 62.0 91 40.7
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 2.8e-08 62.0 91 36.3
Sed0022606 Sechium edule HOM05D000141 ORTHO05D001311 2.8e-08 62.0 75 44.0
VMungo1080G0426 Vigna mungo HOM05D000141 ORTHO05D001311 2.8e-08 62.0 91 36.3
Manes.03G090900 Manihot esculenta HOM05D000141 ORTHO05D001311 4.8e-08 61.2 89 40.4
Manes.15G101400 Manihot esculenta HOM05D000141 ORTHO05D001311 4.8e-08 61.2 95 42.1
Nn3g20438 Nelumbo nucifera HOM05D000141 ORTHO05D001311 4.8e-08 61.2 91 37.4
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 1.1e-07 60.1 91 41.8
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 1.4e-07 59.7 91 40.7
Migut.M00669 Erythranthe guttata HOM05D000141 ORTHO05D001311 1.8e-07 59.3 91 44.0
Potri.001G436200 Populus trichocarpa HOM05D000141 ORTHO05D001311 4.1e-07 58.2 91 36.3
Atru.chr2.1842 Acer truncatum HOM05D000141 ORTHO05D001311 6.9e-07 57.4 96 43.8
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 2.0e-06 55.8 92 41.3
EL10Ac4g08530 Beta vulgaris HOM05D000141 ORTHO05D001311 4.5e-06 54.7 89 44.9
Aqoxy4G00059 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 5.9e-06 54.3 91 41.8
AUR62042369 Chenopodium quinoa HOM05D000141 ORTHO05D001311 5.9e-06 54.3 87 48.3
TWI38G2413 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 7.7e-06 53.9 91 39.6


User provided reference genes

Program Settings