Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 7.3e-210 733.8 415 100.0
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 2.6e-207 725.3 415 99.0
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 5.9e-143 511.5 382 79.8
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 1.1e-133 480.7 369 73.2
Peaxi162Scf00092g00720 Petunia axillaris HOM05D007130 ORTHO05D002078 1.0e-131 474.2 414 66.4
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 6.8e-131 471.5 369 71.5
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 2.7e-63 246.9 425 38.6
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 1.8e-59 234.2 416 37.3
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 1.7e-57 227.6 438 43.2
SGA_v2.0_scaffold39G15213 Striga asiatica HOM05D007130 ORTHO05D002078 3.7e-52 209.9 416 36.3
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 4.0e-46 189.9 416 32.9
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 7.5e-45 185.7 437 34.6
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 1.3e-44 184.9 444 32.2
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 2.2e-44 184.1 418 31.1
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 2.8e-44 183.7 441 31.7
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 8.2e-44 182.2 445 31.2
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 2.4e-43 180.6 444 32.4
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 5.3e-43 179.5 445 33.3
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 5.3e-43 179.5 435 30.3
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 5.3e-43 179.5 284 41.2
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 9.1e-43 178.7 458 31.7
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 9.1e-43 178.7 449 30.7
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 2.0e-42 177.6 441 31.3
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 5.9e-42 176.0 414 32.9
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 1.0e-41 175.3 433 30.3
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 1.0e-41 175.3 417 30.7
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 1.3e-41 174.9 451 29.3
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 1.3e-41 174.9 457 30.9
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 2.2e-41 174.1 434 30.2
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 3.8e-41 173.3 445 31.9
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 3.8e-41 173.3 445 31.9
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 3.8e-41 173.3 445 31.9
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 5.0e-41 172.9 426 31.2
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 1.5e-40 171.4 436 31.7
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 1.5e-40 171.4 436 31.7
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 1.5e-40 171.4 436 31.7
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 1.5e-40 171.4 422 30.8
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 1.9e-40 171.0 443 32.1
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 1.9e-40 171.0 443 32.1
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 1.9e-40 171.0 443 32.1
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 1.9e-40 171.0 417 31.9
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 2.5e-40 170.6 237 40.9
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.2e-40 169.9 417 31.9
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 4.2e-40 169.9 422 31.3
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 7.2e-40 169.1 438 31.1
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 7.2e-40 169.1 417 31.2
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 7.2e-40 169.1 419 31.0
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 1.6e-39 167.9 438 29.9
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 1.6e-39 167.9 438 29.9
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 1.6e-39 167.9 438 29.9
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 2.7e-39 167.2 477 30.6
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.7e-39 166.4 419 29.8
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.7e-39 166.4 421 31.8
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 8.0e-39 165.6 449 29.8
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 8.0e-39 165.6 418 31.3
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 8.0e-39 165.6 447 33.6
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 1.8e-38 164.5 265 37.4
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 1.8e-38 164.5 435 30.8
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 2.3e-38 164.1 436 30.7
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 3.0e-38 163.7 419 32.2
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 8.8e-38 162.2 438 30.1
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 2.0e-37 161.0 417 30.5
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 9.8e-37 158.7 442 33.9
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 2.2e-36 157.5 265 36.6
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 1.8e-35 154.5 439 28.5
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 2.4e-35 154.1 440 29.1
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 5.4e-35 152.9 424 28.5
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 1.2e-34 151.8 431 31.3
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 1.6e-34 151.4 443 27.1
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 2.0e-34 151.0 429 32.2
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 5.9e-34 149.4 423 29.1
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 1.4e-30 138.3 276 34.8
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 2.6e-29 134.0 244 38.5
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 9.8e-29 132.1 414 28.5
DCAR_027220 Daucus carota HOM05D007130 ORTHO05D002078 1.2e-26 125.2 422 28.9
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 1.6e-26 124.8 240 36.2
Migut.G00345 Erythranthe guttata HOM05D007130 ORTHO05D002078 3.8e-25 120.2 413 28.1
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 6.6e-25 119.4 194 37.6
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 6.6e-25 119.4 243 35.0
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 6.6e-25 119.4 238 35.7
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 8.6e-25 119.0 263 33.5
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 8.6e-25 119.0 263 33.5
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 2.1e-23 114.4 244 34.0
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 4.7e-23 113.2 250 35.2
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 6.1e-23 112.8 221 35.3
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-21 108.2 239 31.8
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 3.4e-21 107.1 238 32.4
CAN.G1094.5 Capsicum annuum HOM05D003253 ORTHO05D002078 4.7e-15 86.7 47 83.0
QL10p019789 Quercus lobata HOM05D007130 ORTHO05D002078 4.7e-15 86.7 215 26.5
Nitab4.5_0004256g0010 Nicotiana tabacum HOM05D003253 ORTHO05D002078 1.8e-14 84.7 47 76.6
Nitab4.5_0001342g0080 Nicotiana tabacum HOM05D003253 ORTHO05D002078 2.3e-14 84.3 47 76.6
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 1.2e-13 82.0 253 29.6
Ciclev10023536m.g Citrus clementina HOM05D007130 ORTHO05D002078 7.5e-13 79.3 246 26.4
VMungo0805G0001 Vigna mungo HOM05D007130 ORTHO05D002078 1.3e-12 78.6 101 42.6
Cpa.g.sc79.63 Carica papaya HOM05D007130 ORTHO05D002078 1.7e-12 78.2 198 33.3
VMungo0265G0002 Vigna mungo HOM05D007130 ORTHO05D002078 1.1e-11 75.5 123 38.2
VMungo1215G2341 Vigna mungo HOM05D007130 ORTHO05D002078 1.6e-10 71.6 218 31.2
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 6.0e-10 69.7 97 41.2
GSVIVG01008104001 Vitis vinifera HOM05D000813 ORTHO05D000995 7.8e-10 69.3 261 27.6
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.1e-08 65.5 279 25.8
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-08 65.1 208 29.8
Sopen10g008460 Solanum pennellii HOM05D000014 ORTHO05D000016 2.8e-07 60.8 44 72.7


User provided reference genes

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