Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 3.7e-109 398.3 208 100.0
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 8.5e-106 387.1 208 97.6
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.9e-105 386.0 208 97.6
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.4e-97 359.8 208 91.3
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 5.0e-82 308.1 181 89.0
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.3e-74 283.5 179 83.8
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 3.0e-63 245.7 210 64.8
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 5.2e-63 245.0 211 64.0
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 2.2e-61 239.6 201 67.2
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 3.5e-59 232.3 211 62.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 5.9e-59 231.5 197 65.0
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 3.8e-58 228.8 210 61.4
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 8.6e-58 227.6 211 61.1
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 1.1e-57 227.3 175 69.1
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 2.5e-57 226.1 186 64.0
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 4.3e-57 225.3 215 62.3
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 3.6e-56 222.2 183 67.2
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 6.1e-56 221.5 184 64.1
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.8e-55 219.9 198 61.6
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.8e-55 219.9 208 59.1
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.8e-55 219.9 201 62.7
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 3.1e-55 219.2 213 62.0
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 5.2e-55 218.4 189 64.0
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 6.8e-55 218.0 194 61.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.5e-54 216.9 183 67.2
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.5e-54 216.9 201 62.2
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 2.0e-54 216.5 202 60.9
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 5.8e-54 214.9 201 60.2
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 5.8e-54 214.9 184 65.8
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.3e-53 213.8 183 64.5
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 2.9e-53 212.6 214 60.3
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 2.9e-53 212.6 212 58.0
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 2.9e-53 212.6 208 59.6
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 4.9e-53 211.8 201 60.2
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 4.9e-53 211.8 210 57.6
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 4.9e-53 211.8 198 63.1
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 6.4e-53 211.5 164 69.5
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 8.3e-53 211.1 182 63.7
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.1e-52 210.7 207 61.8
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 1.4e-52 210.3 186 62.9
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.9e-52 209.9 166 66.9
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.9e-52 209.9 165 66.7
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.9e-52 209.9 199 60.3
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 2.4e-52 209.5 210 58.6
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 2.4e-52 209.5 209 56.9
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 4.1e-52 208.8 210 58.1
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 4.1e-52 208.8 165 66.1
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 7.0e-52 208.0 211 57.8
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 7.0e-52 208.0 211 58.8
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.2e-51 207.2 134 80.6
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.2e-51 207.2 208 56.2
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.6e-51 206.8 212 59.0
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.6e-51 206.8 211 57.8
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.6e-51 206.8 165 66.1
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 2.0e-51 206.5 188 63.3
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 2.7e-51 206.1 188 63.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.5e-51 205.7 188 63.3
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 3.5e-51 205.7 214 59.8
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 3.5e-51 205.7 167 68.3
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 6.0e-51 204.9 211 57.8
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 7.8e-51 204.5 191 61.8
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.3e-50 203.8 184 60.3
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 2.3e-50 203.0 214 57.5
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 5.0e-50 201.8 200 59.0
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.5e-49 199.5 182 60.4
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 4.3e-49 198.7 176 61.9
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 4.3e-49 198.7 194 57.2
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 5.6e-49 198.4 196 58.2
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 7.3e-49 198.0 193 58.0
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 9.5e-49 197.6 198 60.6
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 9.5e-49 197.6 205 55.1
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.6e-48 196.8 205 57.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.6e-48 196.8 193 61.7
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.1e-48 196.4 193 61.7
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 2.1e-48 196.4 167 64.7
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 4.7e-48 195.3 213 55.9
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 6.2e-48 194.9 180 61.1
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.4e-47 193.7 198 59.1
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.8e-47 193.4 182 59.9
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 5.2e-47 191.8 180 60.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 6.8e-47 191.4 202 56.4
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.8e-47 191.4 202 56.4
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 8.9e-47 191.0 159 64.8
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 8.9e-47 191.0 172 62.2
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 1.2e-46 190.7 166 63.3
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.2e-46 190.7 183 61.7
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.5e-46 190.3 165 64.2
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 2.0e-46 189.9 166 63.3
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.6e-46 189.5 202 55.9
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 4.4e-46 188.7 207 54.6
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 5.8e-46 188.3 139 70.5
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 9.8e-46 187.6 127 76.4
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 1.1e-44 184.1 146 67.8
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 7.0e-44 181.4 139 67.6
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.6e-43 180.3 135 69.6
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 4.6e-43 178.7 182 58.8
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.0e-43 178.3 162 62.3
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.5e-41 173.7 138 68.1
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.1e-39 167.5 180 53.9
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 7.5e-38 161.4 190 52.6
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.1e-36 157.5 195 47.2
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 7.8e-35 151.4 101 75.2
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.5e-33 147.1 198 43.9
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.8e-31 140.2 137 52.6
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.7e-26 123.6 138 43.5
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 4.7e-24 115.5 89 64.0
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 3.4e-22 109.4 70 81.4
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 6.0e-19 98.6 113 48.7
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 4.0e-15 85.9 114 43.9
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 5.8e-06 55.5 104 31.7


User provided reference genes

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