Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 6.1e-95 350.9 188 100.0
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 1.4e-94 349.7 188 98.9
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 9.1e-83 310.5 192 89.1
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.4e-54 216.9 206 61.7
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.7e-53 211.5 211 59.7
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 1.8e-51 206.5 209 62.2
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 6.6e-49 198.0 210 60.5
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 1.3e-20 104.0 192 43.8
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 2.2e-20 103.2 141 46.8
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 8.4e-20 101.3 142 51.4
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 2.4e-19 99.8 141 45.4
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.4e-19 98.6 224 37.9
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 9.3e-19 97.8 184 44.0
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 9.3e-19 97.8 184 41.3
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 7.8e-18 94.7 198 40.9
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 7.8e-18 94.7 222 35.6
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 1.0e-17 94.4 203 41.9
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 3.9e-17 92.4 140 47.1
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 1.1e-16 90.9 194 41.2
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 3.3e-16 89.4 165 44.8
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 5.6e-16 88.6 187 38.5
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.3e-15 87.4 208 39.4
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 1.6e-15 87.0 159 37.7
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 3.6e-15 85.9 196 38.3
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 6.2e-15 85.1 188 35.6
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 8.1e-15 84.7 159 44.0
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 2.4e-14 83.2 124 46.0
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 3.1e-14 82.8 173 39.9
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 3.1e-14 82.8 179 37.4
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 4.0e-14 82.4 179 37.4
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 4.0e-14 82.4 199 37.7
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 4.0e-14 82.4 117 46.2
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 6.9e-14 81.6 196 34.2
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 9.0e-14 81.3 191 39.3
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 9.0e-14 81.3 179 36.3
Migut.D00103 Erythranthe guttata HOM05D007468 ORTHO05D009051 1.5e-13 80.5 207 40.1
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 1.5e-13 80.5 175 40.0
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 1.5e-13 80.5 171 38.0
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 2.0e-13 80.1 167 40.7
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 2.0e-13 80.1 171 38.6
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.6e-13 79.7 168 41.7
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.6e-13 79.7 167 40.7
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.7e-12 77.0 169 40.2
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 1.7e-12 77.0 184 38.6
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 2.2e-12 76.6 177 36.7
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 2.2e-12 76.6 197 35.0
Sopen06g035970 Solanum pennellii HOM05D007468 ORTHO05D009051 2.2e-12 76.6 201 34.8
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 3.8e-12 75.9 162 39.5
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 6.4e-12 75.1 186 36.0
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 8.4e-12 74.7 173 38.7
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 1.1e-11 74.3 198 39.4
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 4.2e-11 72.4 204 33.3
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 4.2e-11 72.4 199 35.7
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 5.4e-11 72.0 157 40.1
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 5.4e-11 72.0 163 38.7
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 5.4e-11 72.0 202 33.2
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 9.3e-11 71.2 188 35.1
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.6e-10 70.5 181 35.9
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 2.1e-10 70.1 181 38.7
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 2.1e-10 70.1 179 38.0
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 3.5e-10 69.3 170 38.2
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 7.9e-10 68.2 163 37.4
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 1.0e-09 67.8 179 35.2
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.0e-09 67.8 140 37.9
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 1.0e-09 67.8 187 37.4
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 1.3e-09 67.4 143 42.0
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 1.3e-09 67.4 141 39.0
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.3e-09 67.4 220 35.0
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 1.8e-09 67.0 126 42.9
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 2.3e-09 66.6 179 37.4
DCAR_005774 Daucus carota HOM05D007468 ORTHO05D009051 2.3e-09 66.6 152 36.2
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 6.7e-09 65.1 163 38.7
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 1.5e-08 63.9 199 31.7
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 1.9e-08 63.5 166 42.2
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 4.3e-08 62.4 170 38.8
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 5.6e-08 62.0 179 35.8
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 5.6e-08 62.0 163 38.0
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 1.3e-07 60.8 127 36.2
Potri.014G123500 Populus trichocarpa HOM05D007468 ORTHO05D009051 1.3e-07 60.8 175 40.0
Potri.002G199100 Populus trichocarpa HOM05D007468 ORTHO05D009051 1.6e-07 60.5 198 36.4
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 2.8e-07 59.7 159 33.3
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 4.8e-07 58.9 162 32.7
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 6.2e-07 58.5 244 30.3
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 8.1e-07 58.2 143 39.2
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 1.1e-06 57.8 226 27.4
PSO170G3554 Papaver somniferum HOM05D007468 ORTHO05D009051 1.4e-06 57.4 117 38.5
BraA09t35818Z Brassica rapa HOM05D010095 ORTHO05D012148 5.3e-06 55.5 120 42.5
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 6.9e-06 55.1 219 29.2
Actinidia21419 Actinidia chinensis HOM05D007468 ORTHO05D009051 9.0e-06 54.7 149 38.3
Gohir.A12G126800 Gossypium hirsutum HOM05D041120 ORTHO05D009051 9.0e-06 54.7 163 33.7


User provided reference genes

Program Settings