Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 9.8e-233 809.7 386 100.0
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.6e-227 792.3 386 96.9
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.2e-222 776.2 386 95.3
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.9e-208 727.6 387 88.6
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.3e-192 676.4 387 83.7
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 4.2e-183 644.8 360 84.2
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 5.9e-161 571.2 385 71.2
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 2.9e-160 568.9 393 68.7
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 5.5e-159 564.7 389 69.4
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 1.1e-156 557.0 385 68.8
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.5e-156 556.6 390 67.9
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 3.3e-156 555.4 389 68.4
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 1.3e-155 553.5 387 67.7
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 2.2e-155 552.7 371 69.5
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 4.8e-155 551.6 394 66.8
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.1e-154 550.4 372 71.0
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 3.1e-154 548.9 415 64.1
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.0e-153 546.2 394 66.0
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.6e-153 545.8 371 70.1
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 3.4e-153 545.4 390 67.9
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.9e-153 544.7 371 69.3
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.9e-153 544.7 387 68.2
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 2.2e-152 542.7 390 67.4
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.2e-152 542.7 387 67.7
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 5.0e-152 541.6 394 65.7
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 6.5e-152 541.2 398 65.3
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 1.1e-151 540.4 371 69.3
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 4.2e-151 538.5 383 66.3
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 4.2e-151 538.5 383 66.3
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 7.2e-151 537.7 385 67.5
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.2e-150 537.0 439 60.1
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 3.6e-150 535.4 374 69.3
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.0e-149 533.9 392 66.3
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.0e-149 533.9 386 67.6
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 1.8e-149 533.1 392 64.5
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 5.2e-149 531.6 390 64.4
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 6.7e-149 531.2 374 67.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.0e-148 529.6 390 66.9
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 4.4e-148 528.5 369 69.4
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 5.7e-148 528.1 385 65.2
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.3e-147 526.9 388 65.5
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.3e-147 526.9 390 64.9
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 1.7e-147 526.6 390 65.4
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.7e-147 526.6 392 63.8
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 4.8e-147 525.0 395 63.8
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 7.0e-146 521.2 388 63.9
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 9.1e-146 520.8 393 64.6
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.2e-145 520.4 397 62.2
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 3.5e-145 518.8 372 65.3
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 2.2e-144 516.2 393 65.4
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 8.5e-144 514.2 393 64.4
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.9e-143 513.1 386 65.3
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 4.2e-143 511.9 394 64.7
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 9.4e-143 510.8 371 66.6
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 2.1e-142 509.6 391 63.2
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 2.7e-142 509.2 341 71.8
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 2.3e-141 506.1 422 59.2
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 4.0e-141 505.4 390 62.1
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 5.2e-141 505.0 373 65.1
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 6.7e-141 504.6 395 62.5
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 5.7e-140 501.5 346 68.5
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 7.5e-140 501.1 394 61.9
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.7e-139 500.0 387 63.6
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 8.2e-139 497.7 379 65.4
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 7.0e-138 494.6 401 62.1
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 2.0e-137 493.0 375 64.0
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 7.7e-137 491.1 388 61.3
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 7.7e-137 491.1 313 72.8
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.7e-136 490.0 389 62.2
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.8e-136 488.8 387 63.3
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.8e-136 488.8 389 61.4
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.1e-135 487.3 390 62.6
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 9.4e-135 484.2 387 62.3
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 2.7e-134 482.6 388 61.1
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 6.1e-134 481.5 422 58.5
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 1.8e-133 479.9 380 60.3
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.8e-133 479.9 374 65.0
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 5.7e-132 474.9 393 61.3
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.7e-131 473.4 420 58.6
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.8e-131 472.6 386 60.9
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 2.8e-131 472.6 394 59.6
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 8.3e-131 471.1 390 61.0
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.1e-130 470.7 397 58.4
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 7.7e-129 464.5 373 63.5
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.5e-127 460.3 388 59.3
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.5e-127 459.5 389 59.1
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 4.2e-127 458.8 408 56.6
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 4.2e-127 458.8 369 61.2
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 4.7e-126 455.3 391 60.9
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 1.4e-125 453.8 390 59.0
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 2.3e-125 453.0 388 58.8
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.6e-124 449.5 389 57.8
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.4e-124 449.1 387 58.7
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 5.7e-124 448.4 388 57.7
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 7.5e-124 448.0 388 57.2
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 2.8e-123 446.0 373 59.0
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.7e-123 445.7 387 57.9
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 3.1e-122 442.6 374 58.6
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.2e-121 440.7 378 59.8
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.6e-121 440.3 427 54.8
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.7e-121 439.5 371 58.8
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 4.3e-119 432.2 387 55.6
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.2e-117 425.2 385 56.4
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.5e-116 423.7 403 53.8
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 4.6e-113 412.1 340 61.5
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 8.6e-112 407.9 300 64.7
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 9.5e-103 377.9 266 68.4
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 7.3e-95 351.7 247 66.8
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-94 350.5 233 70.4
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 3.5e-89 332.8 379 45.4
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.5e-87 327.4 376 46.5
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.5e-87 327.4 346 49.7
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.2e-86 324.3 377 45.9
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 8.4e-83 311.6 276 55.1
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 4.0e-77 292.7 250 56.8
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.4e-74 283.5 299 47.8
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 4.6e-73 279.3 200 68.5
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 8.4e-67 258.5 173 71.1
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.9e-66 257.3 319 46.7
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.9e-66 257.3 203 59.1
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 3.1e-61 240.0 233 51.1
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 2.6e-52 210.3 374 36.6
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 5.5e-50 202.6 190 53.7
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 8.8e-48 195.3 152 62.5
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.9e-43 180.3 378 33.6
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.8e-40 171.0 118 71.2
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 2.8e-38 163.7 365 32.1
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 1.0e-35 155.2 123 63.4
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 7.4e-31 139.0 148 46.6
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 9.1e-29 132.1 178 39.9
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.8e-22 110.5 171 39.2
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-12 78.2 159 32.7
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-10 71.2 69 44.9
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 2.1e-09 67.8 70 51.4
Cfa026191 Carpinus fangiana HOM05D005667 ORTHO05D124936 5.2e-08 63.2 227 24.7


User provided reference genes

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