Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.8e-290 1001.9 517 100.0
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 3.8e-248 861.3 467 97.0
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 1.6e-222 776.2 546 76.6
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 6.2e-190 667.9 508 71.3
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 2.9e-179 632.5 481 71.9
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 8.4e-163 577.8 410 75.6
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 8.9e-64 248.8 518 36.5
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 6.0e-60 236.1 454 37.7
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.2e-55 221.9 513 34.5
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 5.1e-51 206.5 516 33.9
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.6e-49 200.3 468 35.0
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.8e-48 198.0 526 33.5
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 9.9e-47 192.2 538 32.0
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 2.1e-44 184.5 505 32.9
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 5.1e-43 179.9 459 33.8
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.1e-42 178.7 333 37.8
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 6.2e-41 172.9 532 30.1
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 1.2e-39 168.7 399 36.1
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.1e-37 162.2 525 30.5
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 1.4e-37 161.8 521 29.2
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 4.2e-37 160.2 407 32.9
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.1e-36 157.9 513 31.2
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 2.1e-36 157.9 353 35.4
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 2.7e-36 157.5 405 34.1
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 7.9e-36 156.0 533 30.6
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.3e-35 155.2 440 34.1
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 5.1e-35 153.3 238 39.9
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 8.7e-35 152.5 392 33.9
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 8.7e-35 152.5 521 31.9
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 8.7e-35 152.5 521 30.3
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 1.9e-34 151.4 393 35.1
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.5e-34 151.0 519 29.3
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 5.6e-34 149.8 359 33.4
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.1e-33 147.9 436 31.4
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 6.2e-33 146.4 508 29.5
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.1e-32 145.6 253 39.9
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.1e-32 144.1 248 39.5
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 4.0e-32 143.7 259 36.7
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 9.0e-32 142.5 515 30.5
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.2e-31 142.1 340 34.1
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 3.4e-31 140.6 562 28.3
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 1.0e-30 139.0 516 28.5
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 2.2e-30 137.9 488 29.7
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.9e-30 137.5 249 36.9
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 2.5e-29 134.4 588 27.6
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.2e-29 133.7 433 30.0
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 5.5e-29 133.3 347 32.0
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 9.3e-29 132.5 435 29.4
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 2.1e-28 131.3 440 29.8
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 3.5e-28 130.6 359 31.5
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.8e-27 128.3 519 30.8
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 6.7e-27 126.3 372 32.0
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 1.1e-26 125.6 241 34.9
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 1.5e-26 125.2 237 39.2
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 9.7e-26 122.5 384 31.2
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.6e-25 121.7 371 30.5
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 3.7e-25 120.6 367 31.6
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 3.7e-25 120.6 397 30.2
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 8.2e-25 119.4 277 34.3
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.8e-24 118.2 395 28.1
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.4e-24 117.9 299 33.4
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 6.9e-24 116.3 265 32.8
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.5e-23 115.2 222 39.2
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 4.5e-23 113.6 275 31.3
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 4.5e-23 113.6 227 33.0
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 1.3e-22 112.1 436 29.4
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 1.7e-22 111.7 308 28.9
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 2.2e-22 111.3 233 32.6
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 5.0e-22 110.2 321 31.2
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 5.0e-22 110.2 213 33.8
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 5.0e-22 110.2 522 26.1
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 5.0e-22 110.2 161 44.1
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 3.2e-21 107.5 213 32.9
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 4.2e-21 107.1 192 36.5
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 5.5e-21 106.7 196 35.2
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 7.2e-21 106.3 227 32.6
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 7.9e-20 102.8 522 24.9
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 7.9e-20 102.8 401 27.7
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 7.9e-20 102.8 197 32.5
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.0e-19 102.4 521 25.3
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 2.3e-19 101.3 271 34.3
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 6.7e-19 99.8 239 31.4
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 6.7e-19 99.8 286 30.1
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 5.7e-18 96.7 378 27.0
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 5.7e-18 96.7 93 51.6
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 1.3e-17 95.5 273 29.3
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 4.5e-15 87.0 125 39.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 1.7e-14 85.1 359 27.6
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 6.5e-14 83.2 181 34.8
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 1.6e-12 78.6 93 39.8
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 2.1e-12 78.2 176 31.8
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 1.8e-11 75.1 319 27.9
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.5e-10 72.0 257 29.6
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.5e-10 72.0 215 29.8
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 3.3e-10 70.9 205 30.2
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 7.4e-10 69.7 191 28.3
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 3.1e-08 64.3 235 26.8
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 5.3e-08 63.5 190 28.9
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 5.0e-06 57.0 150 32.0


User provided reference genes

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