Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 0.0e+00 1923.3 1190 100.0
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 0.0e+00 1521.5 1195 71.0
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 0.0e+00 1308.9 1183 62.9
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 0.0e+00 1225.7 1178 59.8
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 0.0e+00 1190.3 675 94.5
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 0.0e+00 1098.2 1193 55.5
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 2.4e-216 756.9 809 56.0
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 8.5e-206 721.8 788 53.8
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 4.5e-199 699.5 783 53.9
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 6.1e-196 689.1 800 52.8
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.7e-193 681.0 746 55.1
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 2.2e-193 680.6 801 52.2
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 6.3e-193 679.1 746 53.9
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 9.2e-192 675.2 751 53.8
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 1.2e-191 674.9 786 50.9
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.6e-191 674.5 607 61.8
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 1.8e-187 661.0 776 50.5
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 1.2e-186 658.3 798 50.4
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 1.3e-185 654.8 811 50.8
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 3.7e-185 653.3 813 50.2
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 7.8e-183 645.6 756 51.5
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 3.9e-182 643.3 811 49.0
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.1e-181 641.7 789 49.2
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 1.5e-181 641.3 812 48.4
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 4.3e-181 639.8 762 51.6
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 5.6e-181 639.4 804 50.2
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 1.6e-180 637.9 917 46.1
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 2.1e-180 637.5 840 49.2
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 2.1e-180 637.5 801 48.7
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 1.8e-179 634.4 804 50.0
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.0e-178 630.9 906 46.2
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 4.4e-178 629.8 747 50.9
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 7.5e-178 629.0 799 50.2
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 1.3e-177 628.2 798 49.0
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.1e-176 625.2 746 50.8
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 4.6e-175 619.8 823 47.6
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 1.3e-174 618.2 878 46.6
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 3.0e-174 617.1 791 48.3
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 3.0e-174 617.1 789 49.4
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 8.6e-174 615.5 814 46.8
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 2.5e-173 614.0 826 46.1
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 2.8e-172 610.5 781 47.8
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 2.3e-171 607.4 846 46.5
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 2.3e-171 607.4 902 45.5
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 8.9e-171 605.5 867 45.7
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 1.5e-170 604.7 847 47.5
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 2.0e-170 604.4 807 48.0
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 4.4e-170 603.2 861 45.2
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.3e-169 601.7 733 50.3
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 2.2e-169 600.9 757 47.2
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 8.3e-169 599.0 814 45.9
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 5.4e-168 596.3 868 44.7
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 3.5e-167 593.6 899 43.9
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 7.8e-167 592.4 816 46.7
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 4.3e-165 586.6 764 48.2
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 2.1e-164 584.3 830 46.0
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 2.8e-164 583.9 737 49.8
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 1.4e-163 581.6 810 45.4
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 5.2e-163 579.7 805 46.1
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 5.2e-163 579.7 902 44.8
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 1.5e-162 578.2 763 48.0
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 2.6e-162 577.4 800 45.8
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 1.3e-161 575.1 724 47.5
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 1.4e-160 571.6 810 46.2
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 4.6e-159 566.6 867 43.6
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 3.0e-158 563.9 811 44.5
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 1.9e-157 561.2 842 43.7
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 3.1e-155 553.9 875 42.7
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 5.2e-155 553.1 766 46.7
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 9.9e-154 548.9 756 45.1
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 1.2e-151 542.0 887 42.8
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 2.1e-151 541.2 445 65.4
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 2.7e-151 540.8 541 58.0
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 2.5e-149 534.3 736 47.4
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 2.1e-148 531.2 880 42.7
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 6.2e-148 529.6 891 41.1
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 5.3e-147 526.6 832 43.8
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 9.0e-147 525.8 903 41.1
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 9.0e-147 525.8 903 41.1
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 5.8e-146 523.1 886 41.9
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 5.8e-146 523.1 886 41.9
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 9.3e-144 515.8 804 41.7
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 2.1e-143 514.6 805 42.9
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 2.7e-143 514.2 838 41.4
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 2.7e-143 514.2 783 44.6
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 3.0e-142 510.8 705 46.7
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.3e-140 505.4 864 40.5
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 1.3e-140 505.4 287 89.9
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 2.1e-140 504.6 899 39.4
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 9.0e-139 499.2 995 37.3
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 4.5e-138 496.9 537 53.8
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 1.3e-137 495.4 997 37.5
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 1.4e-136 491.9 772 42.1
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 5.5e-136 490.0 595 47.7
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 6.5e-129 466.5 669 46.5
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 1.4e-128 465.3 668 46.3
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 1.3e-124 452.2 517 51.1
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.1e-123 449.1 780 40.5
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 2.4e-115 421.4 864 35.4
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 2.1e-111 408.3 586 43.3
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 3.0e-110 404.4 385 57.9
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 2.0e-109 401.7 774 39.4
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 1.3e-108 399.1 561 44.6
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.4e-107 395.6 603 45.9
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 3.1e-107 394.4 825 37.0
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 9.1e-99 366.3 868 34.3
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 3.1e-83 314.7 332 54.8
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 5.2e-70 270.8 451 42.4
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 1.2e-69 269.6 327 46.8
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 7.0e-67 260.4 203 63.1
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 9.2e-67 260.0 190 77.4
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.2e-66 259.6 367 47.1
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.1e-55 220.3 377 44.0
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 1.9e-43 182.6 166 61.4
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 4.2e-43 181.4 483 32.1
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 1.9e-40 172.6 300 35.0
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.5e-32 146.4 137 54.0
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 1.9e-32 146.0 215 45.1
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 1.1e-30 140.2 273 39.9
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 8.7e-25 120.6 332 29.5
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 9.6e-24 117.1 219 36.1
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 8.1e-23 114.0 212 39.6
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.5e-19 101.3 334 30.5
Solyc09g074700.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 4.6e-18 98.2 59 88.1
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 3.9e-17 95.1 83 51.8
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.9e-16 92.8 86 48.8
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.6e-16 91.3 70 67.1
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 9.6e-16 90.5 52 86.5
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 8.4e-12 77.4 66 56.1
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 7.1e-11 74.3 70 54.3
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 5.3e-06 58.2 72 43.1
Actinidia32248 Actinidia chinensis HOM05D002567 ORTHO05D006538 9.0e-06 57.4 61 55.7
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 9.0e-06 57.4 69 43.5


User provided reference genes

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