Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g028650 Solanum pennellii HOM05D019196 ORTHO05D010845 6.1e-48 193.7 93 100.0
CAN.G1395.1 Capsicum annuum HOM05D019196 ORTHO05D010845 2.2e-37 158.7 86 86.0
CSS0049490 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 1.2e-14 83.2 96 52.1
Oeu052072.1 Olea europaea HOM05D019196 ORTHO05D010845 1.2e-14 83.2 92 46.7
CSS0011456 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 4.4e-14 81.3 97 49.5
CSS0015409 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 1.7e-13 79.3 88 47.7
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 3.8e-13 78.2 95 48.4
Manes.12G035800 Manihot esculenta HOM05D009253 ORTHO05D010845 1.1e-12 76.6 91 44.0
Phvul.007G190000 Phaseolus vulgaris HOM05D009253 ORTHO05D010845 2.1e-11 72.4 81 44.4
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 4.6e-11 71.2 87 43.7
Cfa002472 Carpinus fangiana HOM05D009253 ORTHO05D010845 6.0e-11 70.9 83 47.0
Glyma.10G039800 Glycine max HOM05D009253 ORTHO05D010845 6.0e-11 70.9 82 46.3
Gohir.D07G157500 Gossypium hirsutum HOM05D009253 ORTHO05D010845 6.0e-11 70.9 87 44.8
TAR365G0673 Trochodendron aralioides HOM05D009253 ORTHO05D010845 1.0e-10 70.1 84 39.3
Prupe.8G216600 Prunus persica HOM05D009253 ORTHO05D010845 3.9e-10 68.2 64 48.4
Manes.13G040700 Manihot esculenta HOM05D009253 ORTHO05D010845 6.6e-10 67.4 88 39.8
Gohir.A07G150900 Gossypium hirsutum HOM05D009253 ORTHO05D010845 8.7e-10 67.0 82 42.7
Potri.014G192100 Populus trichocarpa HOM05D009253 ORTHO05D010845 8.7e-10 67.0 81 40.7
Nn1g02939 Nelumbo nucifera HOM05D019196 ORTHO05D010845 3.6e-08 61.6 70 41.4
TAR362G0345 Trochodendron aralioides HOM05D009253 ORTHO05D010845 6.2e-08 60.8 92 40.2
COL.COLO4_10585 Corchorus olitorius HOM05D009253 ORTHO05D010845 1.1e-07 60.1 83 43.4
Glyma.13G126300 Glycine max HOM05D009253 ORTHO05D010845 1.1e-07 60.1 85 42.4
Hma1.2p1_1112F.1_g258640 Hydrangea macrophylla HOM05D009253 ORTHO05D010845 1.1e-07 60.1 82 41.5
CiPaw.03G269700 Carya illinoinensis HOM05D009253 ORTHO05D010845 1.8e-07 59.3 87 39.1
TPR.G2669 Trifolium pratense HOM05D009253 ORTHO05D010845 4.0e-07 58.2 89 36.0
Lj5g0016892 Lotus japonicus HOM05D009253 ORTHO05D010845 6.9e-07 57.4 79 39.2
Gohir.D11G139000 Gossypium hirsutum HOM05D040896 ORTHO05D010845 1.2e-06 56.6 87 37.9
Gohir.A11G132900 Gossypium hirsutum HOM05D040896 ORTHO05D010845 1.5e-06 56.2 87 37.9
Sed0026637 Sechium edule HOM05D009253 ORTHO05D010845 1.5e-06 56.2 69 42.0
CiPaw.04G189600 Carya illinoinensis HOM05D009253 ORTHO05D010845 2.0e-06 55.8 56 41.1
Ca_08734_v3 Cicer arietinum L. HOM05D009253 ORTHO05D010845 4.4e-06 54.7 59 39.0
Gorai.007G149200 Gossypium raimondii HOM05D040896 ORTHO05D010845 4.4e-06 54.7 87 36.8


User provided reference genes

Program Settings