Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g026470 Solanum pennellii HOM05D000047 ORTHO05D010949 7.4e-113 410.6 215 100.0
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 7.7e-94 347.4 214 85.5
Sopen09g025040 Solanum pennellii HOM05D000047 ORTHO05D010949 3.8e-93 345.1 215 85.1
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 8.3e-72 274.2 161 87.0
Sopen08g014520 Solanum pennellii HOM05D000047 ORTHO05D010949 1.2e-70 270.4 214 70.6
PGSC0003DMG400040525 Solanum tuberosum HOM05D000047 ORTHO05D010949 3.2e-55 219.2 158 77.8
PGSC0003DMG400017687 Solanum tuberosum HOM05D000199 ORTHO05D010949 1.3e-45 187.2 138 75.4
Sopen01g005710 Solanum pennellii HOM05D000047 ORTHO05D010949 8.6e-45 184.5 118 82.2
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-42 177.6 202 51.0
CAN.G682.7 Capsicum annuum HOM05D000047 ORTHO05D010949 5.4e-39 165.2 165 57.6
PGSC0003DMG400035361 Solanum tuberosum HOM05D000047 ORTHO05D010949 2.1e-38 163.3 106 82.1
PGSC0003DMG400040067 Solanum tuberosum HOM05D000047 ORTHO05D010949 8.6e-37 157.9 104 82.7
PGSC0003DMG400041581 Solanum tuberosum HOM05D000047 ORTHO05D010949 4.3e-36 155.6 150 63.3
Sed0008905 Sechium edule HOM05D000047 ORTHO05D001383 1.1e-34 151.0 156 55.1
CAN.G2150.1 Capsicum annuum HOM05D000550 ORTHO05D000400 8.9e-34 147.9 152 56.6
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 5.8e-33 145.2 176 50.0
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 1.7e-32 143.7 152 49.3
Sopen09g023170 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-32 143.3 219 46.1
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-32 142.9 170 48.8
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-32 142.9 170 48.8
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-32 142.9 170 48.8
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-31 141.0 170 48.2
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 1.9e-31 140.2 170 48.2
PGSC0003DMG400035944 Solanum tuberosum HOM05D000047 ORTHO05D010949 3.2e-31 139.4 114 71.1
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 4.1e-31 139.0 170 48.2
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 4.1e-31 139.0 170 48.2
ClCG09G014950 Citrullus lanatus HOM05D000047 ORTHO05D001383 5.4e-31 138.7 176 43.2
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 7.1e-31 138.3 164 44.5
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.6e-30 135.6 177 44.6
Sopen01g028490 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-30 135.2 156 55.1
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.0e-29 132.9 199 43.2
PGSC0003DMG400034570 Solanum tuberosum HOM05D000047 ORTHO05D010949 3.9e-29 132.5 91 80.2
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 3.3e-28 129.4 217 40.6
PGSC0003DMG400036829 Solanum tuberosum HOM05D000047 ORTHO05D010949 9.6e-28 127.9 145 52.4
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 1.4e-26 124.0 86 66.3
PGSC0003DMG400007642 Solanum tuberosum HOM05D000047 ORTHO05D010949 1.8e-26 123.6 143 57.3
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 4.0e-26 122.5 204 40.2
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 1.2e-25 120.9 86 65.1
CAN.G134.185 Capsicum annuum HOM05D000047 ORTHO05D010949 2.6e-25 119.8 154 49.4
Sopen05g014910 Solanum pennellii HOM05D000047 ORTHO05D010949 5.8e-25 118.6 146 52.1
ClCG04G003080 Citrullus lanatus HOM05D000047 ORTHO05D001383 6.4e-24 115.2 159 41.5
PGSC0003DMG400034520 Solanum tuberosum HOM05D000047 ORTHO05D010949 6.4e-24 115.2 88 72.7
PGSC0003DMG400034920 Solanum tuberosum HOM05D000047 ORTHO05D010949 1.1e-23 114.4 76 80.3
Sopen01g008120 Solanum pennellii HOM05D000047 ORTHO05D010949 1.9e-23 113.6 182 46.2
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-22 110.9 161 41.6
PGSC0003DMG400039104 Solanum tuberosum HOM05D000047 ORTHO05D010949 2.1e-22 110.2 100 59.0
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 6.0e-22 108.6 162 37.7
PGSC0003DMG400044386 Solanum tuberosum HOM05D000047 ORTHO05D010949 7.8e-22 108.2 128 53.1
Thecc.01G147000 Theobroma cacao HOM05D000047 ORTHO05D001383 7.8e-22 108.2 213 33.8
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.0e-21 107.8 189 34.4
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 3.0e-21 106.3 192 37.5
PGSC0003DMG400041787 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.0e-21 106.3 172 39.5
Sopen06g006970 Solanum pennellii HOM05D000047 ORTHO05D010949 3.9e-21 105.9 91 61.5
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 5.1e-21 105.5 161 40.4
PGSC0003DMG400038224 Solanum tuberosum HOM05D000047 ORTHO05D001383 5.1e-21 105.5 168 37.5
CAN.G1076.14 Capsicum annuum HOM05D000152 ORTHO05D001383 1.1e-20 104.4 162 35.2
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-20 104.4 194 33.0
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-20 104.0 159 37.7
FvH4_4g22272 Fragaria vesca HOM05D008419 ORTHO05D008839 1.9e-20 103.6 204 35.8
Hund05696 Selenicereus undatus HOM05D000070 ORTHO05D001383 2.5e-20 103.2 193 32.6
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-20 103.2 159 38.4
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 3.3e-20 102.8 159 38.4
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-20 102.8 173 37.6
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 5.6e-20 102.1 161 36.0
Sopen02g002090 Solanum pennellii HOM05D000047 ORTHO05D001383 5.6e-20 102.1 160 38.1
CAN.G11.15 Capsicum annuum HOM05D000047 ORTHO05D010949 7.3e-20 101.7 117 48.7
CAN.G587.66 Capsicum annuum HOM05D000047 ORTHO05D010949 7.3e-20 101.7 83 63.9
MELO3C021895.2 Cucumis melo HOM05D001244 ORTHO05D001076 7.3e-20 101.7 78 62.8
Hund07466 Selenicereus undatus HOM05D000047 ORTHO05D001383 7.3e-20 101.7 175 34.3
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 7.3e-20 101.7 159 37.7
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 7.3e-20 101.7 159 37.7
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 164 36.6
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 7.3e-20 101.7 159 37.7
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-20 101.7 159 37.7
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-19 100.9 159 37.7
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-19 100.5 159 37.1
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-19 100.5 173 37.6
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-19 100.5 159 37.7
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-19 100.1 159 37.1
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 3.6e-19 99.4 159 37.1
PGSC0003DMG400034544 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.6e-19 99.4 157 37.6
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-19 99.0 159 37.1
Sopen10g015700 Solanum pennellii HOM05D000047 ORTHO05D001383 4.8e-19 99.0 159 37.7
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-19 98.6 159 36.5
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-19 98.6 159 37.1
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-19 98.6 173 37.6
Potri.018G011950 Populus trichocarpa HOM05D000047 ORTHO05D001383 8.1e-19 98.2 195 35.4
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 8.1e-19 98.2 155 36.8
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-18 97.4 177 32.8
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-18 97.4 159 37.1
Sopen02g001350 Solanum pennellii HOM05D000047 ORTHO05D010949 1.4e-18 97.4 89 58.4
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-18 97.4 155 38.1
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-18 97.4 164 35.4
Hund02117 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.8e-18 97.1 82 51.2
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-18 97.1 166 31.9
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 2.4e-18 96.7 159 36.5
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 3.1e-18 96.3 159 36.5
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.0e-18 95.9 108 44.4
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 4.0e-18 95.9 155 37.4
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 4.0e-18 95.9 159 35.8
Hund20685 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.3e-18 95.5 177 33.3
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 5.3e-18 95.5 159 35.8
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 6.9e-18 95.1 159 36.5
Sed0016038 Sechium edule HOM05D000047 ORTHO05D001383 1.5e-17 94.0 137 47.4
Sopen05g016310 Solanum pennellii HOM05D000047 ORTHO05D010949 1.5e-17 94.0 142 45.1
Sopen10g008380 Solanum pennellii HOM05D000047 ORTHO05D010949 1.5e-17 94.0 112 51.8
Sopen09g016430 Solanum pennellii HOM05D000047 ORTHO05D010949 2.0e-17 93.6 188 37.2
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-17 93.2 159 35.8
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-17 92.8 87 49.4
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-17 92.4 159 35.8
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-17 92.4 188 35.6
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-17 92.4 169 32.0
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 5.8e-17 92.0 154 35.7
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 7.6e-17 91.7 159 35.2
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 9.9e-17 91.3 70 61.4
CAN.G1967.2 Capsicum annuum HOM05D002351 ORTHO05D002501 1.3e-16 90.9 128 43.0
CAN.G896.8 Capsicum annuum HOM05D002351 ORTHO05D002501 1.3e-16 90.9 128 43.0
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-16 90.9 163 36.8
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-16 90.9 161 35.4
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.9e-16 89.7 162 35.8
Hund08511 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.9e-16 89.7 80 47.5
Sed0019732 Sechium edule HOM05D020903 ORTHO05D001383 4.9e-16 89.0 129 42.6
Hund14863 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.9e-16 89.0 164 34.8
Sed0005898 Sechium edule HOM05D010179 ORTHO05D001383 6.4e-16 88.6 119 45.4
Sed0009351 Sechium edule HOM05D000047 ORTHO05D001383 1.1e-15 87.8 161 42.2
Sopen04g015000 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-15 87.4 129 46.5
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-15 87.4 191 30.9
PGSC0003DMG400039287 Solanum tuberosum HOM05D000047 ORTHO05D010949 1.9e-15 87.0 101 54.5
Sed0021823 Sechium edule HOM05D010179 ORTHO05D001383 5.4e-15 85.5 119 44.5
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 5.4e-15 85.5 87 46.0
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 7.1e-15 85.1 158 30.4
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 7.1e-15 85.1 87 46.0
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 7.1e-15 85.1 82 50.0
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.2e-14 84.3 61 59.0
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-14 84.3 87 46.0
CAN.G322.98 Capsicum annuum HOM05D000324 ORTHO05D001014 2.1e-14 83.6 140 34.3
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-14 83.6 179 33.0
FvH4_5g32461 Fragaria vesca HOM05D000047 ORTHO05D001383 3.5e-14 82.8 126 38.9
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-14 82.8 87 46.0
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-14 82.8 123 39.0
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-13 80.9 115 39.1
PGSC0003DMG400046850 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.3e-13 80.9 206 33.0
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-13 79.3 76 48.7
Sopen10g011330 Solanum pennellii HOM05D000047 ORTHO05D010949 5.1e-13 79.0 111 51.4
Hund14969 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.7e-13 78.6 55 58.2
PGSC0003DMG400040592 Solanum tuberosum HOM05D000047 ORTHO05D010949 8.7e-13 78.2 74 56.8
FAN20G1001 Fragaria x ananassa HOM05D000047 ORTHO05D001383 2.5e-12 76.6 56 62.5
Sopen03g012850 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-12 76.6 164 32.9
PGSC0003DMG400036246 Solanum tuberosum HOM05D000047 ORTHO05D010949 2.5e-12 76.6 78 52.6
Sopen12g027080 Solanum pennellii HOM05D000047 ORTHO05D012839 9.6e-12 74.7 91 51.6
Sed0000384 Sechium edule HOM05D010179 ORTHO05D001383 1.6e-11 73.9 120 39.2
PGSC0003DMG400046994 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.6e-11 73.9 158 31.6
COL.COLO4_05670 Corchorus olitorius HOM05D000047 ORTHO05D001383 2.8e-11 73.2 71 52.1
Sed0003251 Sechium edule HOM05D020903 ORTHO05D001383 2.8e-11 73.2 117 40.2
Sopen02g005410 Solanum pennellii HOM05D000047 ORTHO05D010949 4.8e-11 72.4 137 38.7
Sopen02g013890 Solanum pennellii HOM05D000047 ORTHO05D001383 4.8e-11 72.4 183 29.5
Sopen02g008820 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-11 72.0 191 30.9
PGSC0003DMG400042940 Solanum tuberosum HOM05D010883 ORTHO05D012839 6.2e-11 72.0 96 45.8
ClCG03G010450 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.1e-10 71.2 160 30.6
Sopen01g010890 Solanum pennellii HOM05D000047 ORTHO05D010949 1.1e-10 71.2 79 49.4
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-10 70.5 139 33.1
FAN27G2321 Fragaria x ananassa HOM05D008419 ORTHO05D001383 4.0e-10 69.3 128 34.4
Sed0019829 Sechium edule HOM05D000047 ORTHO05D001383 4.0e-10 69.3 142 40.8
FAN08G3610 Fragaria x ananassa HOM05D008419 ORTHO05D008839 6.9e-10 68.6 125 34.4
PGSC0003DMG400026615 Solanum tuberosum HOM05D000047 ORTHO05D010949 6.9e-10 68.6 54 64.8
Sed0016940 Sechium edule HOM05D000047 ORTHO05D001383 9.0e-10 68.2 41 68.3
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 7.6e-09 65.1 41 63.4
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 2.9e-08 63.2 54 55.6
ClCG02G008530 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.8e-08 62.8 177 28.2
Sopen12g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-08 62.8 135 31.9
PGSC0003DMG400035721 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.8e-08 62.8 105 34.3
Sopen09g024340 Solanum pennellii HOM05D000047 ORTHO05D001383 8.4e-08 61.6 41 63.4
Sed0004738 Sechium edule HOM05D020903 ORTHO05D001383 3.2e-07 59.7 125 36.0
FvH4_3g07261 Fragaria vesca HOM05D000047 ORTHO05D001383 4.2e-07 59.3 86 39.5
FvH4_3g22807 Fragaria vesca HOM05D008419 ORTHO05D008839 4.2e-07 59.3 78 41.0
Hund18119 Selenicereus undatus HOM05D009315 ORTHO05D008839 4.2e-07 59.3 171 28.7
FvH4_5g28911 Fragaria vesca HOM05D000047 ORTHO05D001383 5.5e-07 58.9 98 33.7
Hund11047 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.5e-07 58.9 176 25.0
Sc18g0005220 Simmondsia chinensis HOM05D000047 ORTHO05D001383 9.3e-07 58.2 47 57.4
PGSC0003DMG400043601 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.2e-06 57.8 80 40.0
Rhsim05G0112700 Rhododendron simsii HOM05D000981 ORTHO05D000845 3.5e-06 56.2 108 33.3
Sopen03g013300 Solanum pennellii HOM05D000047 ORTHO05D010949 6.0e-06 55.5 76 44.7


User provided reference genes

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