Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g026360 Solanum pennellii HOM05D002833 ORTHO05D019253 4.6e-81 304.7 174 100.0
Sopen04g023680 Solanum pennellii HOM05D000002 ORTHO05D019253 3.6e-49 198.7 186 68.8
Sopen09g026230 Solanum pennellii HOM05D002833 ORTHO05D019253 1.3e-27 127.1 77 77.9
Sopen11g011380 Solanum pennellii HOM05D002833 ORTHO05D003210 2.0e-23 113.2 119 54.6
Sopen06g002190 Solanum pennellii HOM05D002833 ORTHO05D019253 7.8e-20 101.3 191 48.7
Sopen11g009220 Solanum pennellii HOM05D002833 ORTHO05D003210 1.0e-19 100.9 175 42.3
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-18 96.7 192 48.4
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-17 92.4 209 39.7
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-17 92.4 209 39.7
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 4.7e-17 92.0 91 53.8
Lj2g0012025 Lotus japonicus HOM05D000391 ORTHO05D000293 2.7e-12 76.3 114 41.2
ECA240G2389 Erigeron canadensis HOM05D000002 ORTHO05D003210 1.0e-11 74.3 117 38.5
Medtr0134s0080 Medicago truncatula HOM05D002833 ORTHO05D003210 5.0e-11 72.0 97 43.3
ECA236G5050 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-11 71.6 95 38.9
Sopen01g011230 Solanum pennellii HOM05D000047 ORTHO05D003210 8.6e-11 71.2 53 62.3
Sopen12g010610 Solanum pennellii HOM05D002833 ORTHO05D019253 1.5e-10 70.5 45 73.3
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 4.3e-10 68.9 77 50.6
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 7.3e-10 68.2 75 50.7
HanXRQChr02g0054271 Helianthus annuus HOM05D002833 ORTHO05D003210 2.1e-09 66.6 108 38.9
HanXRQChr03g0061761 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-08 63.9 100 42.0
HanXRQChr10g0286781 Helianthus annuus HOM05D002833 ORTHO05D019253 1.4e-08 63.9 69 46.4
HanXRQChr14g0460451 Helianthus annuus HOM05D041004 ORTHO05D003210 2.3e-08 63.2 91 38.5
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 5.2e-08 62.0 98 37.8
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 2.6e-07 59.7 89 48.3
ECA246G0664 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-07 58.2 88 39.8
Ah.04g152140 Amaranthus hybridus HOM05D002833 ORTHO05D003210 4.9e-06 55.5 114 36.0
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 4.9e-06 55.5 66 50.0
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 4.9e-06 55.5 66 50.0
Sopen05g015750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 36 80.6
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 55.5 66 50.0
ECA233G2682 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 78 41.0


User provided reference genes

Program Settings