Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g025510 Solanum pennellii HOM05D006210 ORTHO05D007510 6.0e-211 737.3 372 100.0
PGSC0003DMG400007719 Solanum tuberosum HOM05D006210 ORTHO05D007510 1.1e-196 689.9 373 94.9
Nitab4.5_0000385g0060 Nicotiana tabacum HOM05D006210 ORTHO05D007510 5.0e-157 558.1 373 78.8
Rhsim13G0040700 Rhododendron simsii HOM05D006210 ORTHO05D007510 1.5e-142 510.0 372 67.5
QL09p042418 Quercus lobata HOM05D006210 ORTHO05D007510 6.5e-141 504.6 379 67.3
Actinidia30115 Actinidia chinensis HOM05D006210 ORTHO05D007510 2.1e-139 499.6 371 68.5
GSVIVG01028451001 Vitis vinifera HOM05D006210 ORTHO05D007510 3.0e-138 495.7 374 67.6
SalBow5G1930 Salvia bowleyana HOM05D006210 ORTHO05D007510 3.3e-137 492.3 380 67.1
MSTRG.22887 Avicennia marina HOM05D006210 ORTHO05D007510 4.4e-137 491.9 370 68.1
CiPaw.03G272200 Carya illinoinensis HOM05D006210 ORTHO05D007510 4.4e-137 491.9 368 66.6
Lj1C76G7 Lonicera japonica HOM05D006210 ORTHO05D007510 3.1e-135 485.7 374 65.8
Gohir.A11G134300 Gossypium hirsutum HOM05D006210 ORTHO05D007510 1.6e-134 483.4 368 66.6
Thecc.01G247800 Theobroma cacao HOM05D006210 ORTHO05D007510 2.0e-134 483.0 368 65.5
Gohir.D11G140400 Gossypium hirsutum HOM05D006210 ORTHO05D007510 3.5e-134 482.3 368 66.6
Ciclev10020743m.g Citrus clementina HOM05D006210 ORTHO05D007510 1.0e-133 480.7 369 66.7
Peaxi162Scf00043g00235 Petunia axillaris HOM05D006210 ORTHO05D007510 1.3e-133 480.3 338 75.1
Potri.002G255300 Populus trichocarpa HOM05D006210 ORTHO05D007510 2.9e-133 479.2 369 67.5
CSS0033273 Camellia sinensis var. sinensis HOM05D006210 ORTHO05D007510 5.0e-133 478.4 372 66.7
Prupe.1G573100 Prunus persica HOM05D006210 ORTHO05D007510 6.5e-133 478.0 369 67.2
Oeu058104.1 Olea europaea HOM05D006210 ORTHO05D007510 1.5e-132 476.9 373 65.1
Duzib138G0227 Durio zibethinus HOM05D006210 ORTHO05D007510 4.2e-132 475.3 368 64.9
MBI10_g26060_MAGBIO Magnolia biondii HOM05D006210 ORTHO05D007510 4.2e-132 475.3 369 63.7
FvH4_2g20260 Fragaria vesca HOM05D006210 ORTHO05D007510 2.7e-131 472.6 370 65.4
Dinv43053 Davidia involucrata HOM05D006210 ORTHO05D007510 4.7e-131 471.9 346 70.8
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 4.7e-131 471.9 366 65.3
CANSAT01G0995 Cannabis sativa HOM05D006210 ORTHO05D007510 8.0e-131 471.1 369 64.5
Migut.O00355 Erythranthe guttata HOM05D006210 ORTHO05D007510 2.3e-130 469.5 372 65.6
Nn1g03023 Nelumbo nucifera HOM05D006210 ORTHO05D007510 2.3e-130 469.5 368 63.9
Manes.13G038600 Manihot esculenta HOM05D006210 ORTHO05D007510 3.0e-130 469.2 368 64.9
ECA247G1810 Erigeron canadensis HOM05D006210 ORTHO05D007510 5.2e-130 468.4 369 65.6
Sed0025577 Sechium edule HOM05D006210 ORTHO05D007510 5.2e-130 468.4 369 63.4
TPR.G28794 Trifolium pratense HOM05D006210 ORTHO05D007510 2.6e-129 466.1 369 64.5
Eucgr.A01369 Eucalyptus grandis HOM05D006210 ORTHO05D007510 9.7e-129 464.2 368 65.5
TWI18G1043 Tripterygium wilfordii HOM05D006210 ORTHO05D007510 6.3e-128 461.5 368 63.0
TAR362G1053 Trochodendron aralioides HOM05D006210 ORTHO05D007510 8.2e-128 461.1 369 63.7
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum HOM05D006210 ORTHO05D007510 1.4e-127 460.3 368 63.0
MELO3C012833.2 Cucumis melo HOM05D006210 ORTHO05D007510 2.4e-127 459.5 369 62.6
HanXRQChr10g0280241 Helianthus annuus HOM05D006210 ORTHO05D007510 3.1e-127 459.1 370 63.8
Hund18317 Selenicereus undatus HOM05D006210 ORTHO05D007510 3.1e-127 459.1 369 61.8
Phvul.007G154100 Phaseolus vulgaris HOM05D006210 ORTHO05D007510 9.1e-127 457.6 370 63.5
CsaV3_3G028470 Cucumis sativus L. HOM05D006210 ORTHO05D007510 1.6e-126 456.8 368 62.2
Glyma.13G127800 Glycine max HOM05D006210 ORTHO05D007510 1.6e-126 456.8 370 63.5
THA.LOC104801120 Tarenaya hassleriana HOM05D006210 ORTHO05D007510 4.5e-126 455.3 367 63.2
PGR031G0293 Punica granatum HOM05D006210 ORTHO05D007510 2.2e-125 453.0 366 63.7
BraA09t42139Z Brassica rapa HOM05D006210 ORTHO05D007510 2.9e-125 452.6 385 60.0
Lalb_Chr21g0314151 Lupinus albus HOM05D006210 ORTHO05D007510 2.9e-125 452.6 379 62.3
Ca_09640_v3 Cicer arietinum L. HOM05D006210 ORTHO05D007510 3.8e-125 452.2 370 64.1
Sp1g02950 Schrenkiella parvula HOM05D006210 ORTHO05D007510 6.5e-125 451.4 370 61.4
unitig_22.g6263 Utricularia gibba HOM05D006210 ORTHO05D007510 8.5e-125 451.1 376 61.4
Solyc09g064380.3 Solanum lycopersicum HOM05D006210 ORTHO05D007510 1.9e-124 449.9 245 95.5
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 2.5e-124 449.5 335 66.9
BolC8t52775H Brassica oleracea HOM05D006210 ORTHO05D007510 3.2e-124 449.1 390 59.2
Psat6g064440 Pisum sativum HOM05D006210 ORTHO05D007510 1.6e-123 446.8 371 63.3
Carub.0001s0328 Capsella rubella HOM05D006210 ORTHO05D007510 6.1e-123 444.9 370 61.1
Aqoxy5G00102 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 1.0e-122 444.1 368 61.4
Glyma.10G040900 Glycine max HOM05D006210 ORTHO05D007510 1.0e-122 444.1 370 61.4
AT1G04130 Arabidopsis thaliana HOM05D006210 ORTHO05D007510 2.3e-122 443.0 370 59.7
CARHR003480 Cardamine hirsuta HOM05D006210 ORTHO05D007510 2.3e-122 443.0 368 60.9
Lj5g0001397 Lotus japonicus HOM05D006210 ORTHO05D007510 2.3e-122 443.0 370 62.7
FAN27G1100 Fragaria x ananassa HOM05D006210 ORTHO05D007510 4.0e-122 442.2 370 61.6
PSO210G7683 Papaver somniferum HOM05D006210 ORTHO05D007510 5.2e-122 441.8 371 62.5
Aa31LG1G20710 Aethionema arabicum HOM05D006210 ORTHO05D007510 8.8e-122 441.0 372 60.2
PSO170G6901 Papaver somniferum HOM05D006210 ORTHO05D007510 3.4e-121 439.1 371 62.3
AL1G13730 Arabidopsis lyrata HOM05D006210 ORTHO05D007510 3.7e-120 435.6 370 59.2
Thhalv10008004m.g Eutrema salsugineum HOM05D006210 ORTHO05D007510 8.3e-120 434.5 370 60.3
BcaC07g42211 Brassica carinata HOM05D006210 ORTHO05D007510 1.1e-119 434.1 370 60.3
ClCG00G001600 Citrullus lanatus HOM05D006210 ORTHO05D007510 4.1e-119 432.2 370 60.5
COL.COLO4_37372 Corchorus olitorius HOM05D006210 ORTHO05D007510 4.1e-119 432.2 371 59.3
SGA_v2.0_scaffold382G50403 Striga asiatica HOM05D006210 ORTHO05D007510 4.1e-119 432.2 341 63.9
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 1.1e-116 424.1 386 60.9
A09p68040 Brassica napus HOM05D006210 ORTHO05D007510 1.5e-116 423.7 370 58.6
C08p52480 Brassica napus HOM05D006210 ORTHO05D007510 1.9e-116 423.3 370 58.4
Cpa.g.sc87.54 Carica papaya HOM05D006210 ORTHO05D007510 9.5e-116 421.0 423 55.8
VMungo0720G2771 Vigna mungo HOM05D006210 ORTHO05D007510 6.1e-115 418.3 370 59.2
Ah.15g091520 Amaranthus hybridus HOM05D006210 ORTHO05D007510 1.0e-114 417.5 370 57.3
Cc01_g17680 Coffea canephora HOM05D006210 ORTHO05D007510 1.4e-114 417.2 368 61.1
AUR62025420 Chenopodium quinoa HOM05D006210 ORTHO05D007510 4.4e-113 412.1 370 56.5
SEGI_04783 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 6.3e-112 408.3 369 56.4
arahy.Tifrunner.gnm1.ann1.J3R5E0 Arachis hypogaea HOM05D006210 ORTHO05D007510 1.1e-111 407.5 355 62.5
CAN.G119.7 Capsicum annuum HOM05D006210 ORTHO05D007510 2.0e-110 403.3 241 86.3
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea HOM05D006210 ORTHO05D007510 1.1e-108 397.5 370 57.6
BcaC07g42208 Brassica carinata HOM05D006210 ORTHO05D007510 1.1e-108 397.5 374 56.1
Haze_24722 Corylus avellana HOM05D006210 ORTHO05D007510 6.4e-104 381.7 359 56.3
ClCG07G001460 Citrullus lanatus HOM05D006210 ORTHO05D007510 1.2e-102 377.5 389 53.5
arahy.Tifrunner.gnm1.ann1.GM89QY Arachis hypogaea HOM05D006210 ORTHO05D007510 1.0e-101 374.4 350 58.9
Zm00001eb057360 Zea mays HOM05D006210 ORTHO05D007510 2.3e-101 373.2 380 52.1
Nitab4.5_0000392g0100 Nicotiana tabacum HOM05D006210 ORTHO05D007510 2.9e-96 356.3 313 64.5
AUR62008821 Chenopodium quinoa HOM05D006210 ORTHO05D007510 3.5e-94 349.4 370 50.8
FAN24G1818 Fragaria x ananassa HOM05D006210 ORTHO05D007510 1.9e-92 343.6 245 72.2
RcHm_v2.0_Chr6g0286041 Rosa chinensis HOM05D006210 ORTHO05D007510 3.6e-91 339.3 240 72.5
arahy.Tifrunner.gnm1.ann1.5C4SPF Arachis hypogaea HOM05D006210 ORTHO05D007510 1.2e-89 334.3 247 68.4
MD10G1174300 Malus domestica HOM05D006210 ORTHO05D007510 2.0e-89 333.6 240 71.2
DCAR_000557 Daucus carota HOM05D006210 ORTHO05D007510 8.3e-88 328.2 240 70.4
ATR0723G059 Amborella trichopoda HOM05D006210 ORTHO05D007510 1.4e-87 327.4 370 50.0
Mapoly0012s0146 Marchantia polymorpha HOM05D006210 ORTHO05D007510 7.1e-87 325.1 371 46.9
Hma1.2p1_2051F.1_g312575 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 2.3e-85 320.1 240 68.8
HPP92_025825 Vanilla planifolia HOM05D006210 ORTHO05D007510 2.1e-83 313.5 369 48.5
Pp3c19_11990 Physcomitrium patens HOM05D006210 ORTHO05D007510 3.4e-81 306.2 369 45.3
EL10Ac7g17713 Beta vulgaris HOM05D006210 ORTHO05D007510 1.7e-77 293.9 241 62.7
Gorai.007G150600 Gossypium raimondii HOM05D006210 ORTHO05D007510 6.6e-77 292.0 221 68.8
Lsat_1_v5_gn_9_11700 Lactuca sativa HOM05D006210 ORTHO05D007510 5.6e-76 288.9 294 56.8
AagrBONN_evm.TU.Sc2ySwM_228.4049__4050 Anthoceros agrestis HOM05D006210 ORTHO05D007510 1.4e-74 284.3 303 49.8
Prupe.8G213100 Prunus persica HOM05D006210 ORTHO05D007510 3.1e-74 283.1 367 48.0
CAN.G119.6 Capsicum annuum HOM05D006210 ORTHO05D007510 1.2e-57 228.0 130 83.8
CBR_g36953 Chara braunii HOM05D006210 ORTHO05D007510 2.1e-54 217.2 312 41.7
Os03g0750100 Oryza sativa ssp. japonica HOM05D006210 ORTHO05D007510 2.1e-54 217.2 273 46.5
Sc05g0002800 Simmondsia chinensis HOM05D006210 ORTHO05D007510 4.8e-51 206.1 368 36.4
PRCOL_00004543 Prasinoderma coloniale HOM05D006210 ORTHO05D007510 4.5e-41 172.9 386 33.7
MD10G1174200 Malus domestica HOM05D006210 ORTHO05D007510 2.3e-37 160.6 127 59.1
MCO01G218 Micromonas commoda HOM05D006210 ORTHO05D007510 3.0e-37 160.2 376 33.0
DCAR_000556 Daucus carota HOM05D006210 ORTHO05D007510 2.5e-36 157.1 127 55.9
Cre08.g375650 Chlamydomonas reinhardtii HOM05D006210 ORTHO05D007510 2.2e-35 154.1 349 32.1
RcHm_v2.0_Chr6g0286031 Rosa chinensis HOM05D006210 ORTHO05D007510 4.8e-35 152.9 139 52.5
Hma1.2p1_0559F.1_g178660 Hydrangea macrophylla HOM05D000705 ORTHO05D007510 1.3e-32 144.8 101 73.3
HanXRQChr01g0013201 Helianthus annuus HOM05D006210 ORTHO05D007510 1.6e-30 137.9 125 56.0
MD05G1186500 Malus domestica HOM05D006210 ORTHO05D007510 1.8e-29 134.4 90 75.6
vmacro02716 Vaccinium macrocarpon HOM05D006210 ORTHO05D007510 6.9e-26 122.5 100 58.0
Actinidia37561 Actinidia chinensis HOM05D006210 ORTHO05D007510 9.4e-23 112.1 110 49.1
MD05G1186300 Malus domestica HOM05D006210 ORTHO05D007510 2.2e-19 100.9 87 56.3
TAR349G0001 Trochodendron aralioides HOM05D006210 ORTHO05D007510 8.2e-19 99.0 187 36.9
Sc05g0002820 Simmondsia chinensis HOM05D006210 ORTHO05D007510 5.3e-18 96.3 103 46.6
Cfa024968 Carpinus fangiana HOM05D006210 ORTHO05D007510 4.0e-13 80.1 243 30.5
SEGI_25119 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 2.4e-10 70.9 48 62.5
SMO196G0213 Selaginella moellendorffii HOM05D006210 ORTHO05D007510 7.0e-10 69.3 96 39.6
Zm00001eb416010 Zea mays HOM05D017284 ORTHO05D007510 9.1e-10 68.9 76 43.4
SMO234G0002 Selaginella moellendorffii HOM05D006210 ORTHO05D007510 3.5e-09 67.0 106 38.7
AL1G66140 Arabidopsis lyrata HOM05D001340 ORTHO05D005342 1.7e-08 64.7 159 37.1
AT1G56440 Arabidopsis thaliana HOM05D001340 ORTHO05D005342 2.2e-08 64.3 154 37.0
Carub.0002s0770 Capsella rubella HOM05D001340 ORTHO05D005342 3.8e-08 63.5 165 33.9
BcaC02g10729 Brassica carinata HOM05D001340 ORTHO05D005342 1.9e-07 61.2 114 38.6
CARHR055170 Cardamine hirsuta HOM05D001340 ORTHO05D005342 1.9e-07 61.2 131 36.6
PSO170G0183 Papaver somniferum HOM05D001340 ORTHO05D005342 2.5e-07 60.8 151 34.4
BcaB04g20162 Brassica carinata HOM05D001340 ORTHO05D005342 3.2e-07 60.5 169 32.0
BcaC09g49556 Brassica carinata HOM05D001340 ORTHO05D005342 4.2e-07 60.1 148 35.1
Ca_03995_v3 Cicer arietinum L. HOM05D000868 ORTHO05D000711 4.2e-07 60.1 118 38.1
Medtr2g078020 Medicago truncatula HOM05D000868 ORTHO05D000711 4.2e-07 60.1 119 37.0
Sp2g06370 Schrenkiella parvula HOM05D001340 ORTHO05D005342 4.2e-07 60.1 186 32.3
Gohir.D11G283800 Gossypium hirsutum HOM05D001340 ORTHO05D005342 7.2e-07 59.3 142 32.4
Gorai.007G306700 Gossypium raimondii HOM05D001340 ORTHO05D005342 7.2e-07 59.3 142 32.4
SGA_v2.0_scaffold4G01971 Striga asiatica HOM05D001340 ORTHO05D005342 9.4e-07 58.9 109 38.5
Ah.04g158660 Amaranthus hybridus HOM05D001340 ORTHO05D005342 1.2e-06 58.5 148 31.1
Potri.005G014100 Populus trichocarpa HOM05D001340 ORTHO05D005342 1.2e-06 58.5 109 38.5
PRCOL_00004000 Prasinoderma coloniale HOM05D002345 ORTHO05D002460 1.6e-06 58.2 135 31.9
Prupe.6G312500 Prunus persica HOM05D001340 ORTHO05D002318 1.6e-06 58.2 133 34.6
TPR.G30901 Trifolium pratense HOM05D000868 ORTHO05D000711 1.6e-06 58.2 119 36.1
Migut.B00963 Erythranthe guttata HOM05D001340 ORTHO05D005342 2.1e-06 57.8 134 35.1
Gohir.A11G273700 Gossypium hirsutum HOM05D001340 ORTHO05D005342 2.1e-06 57.8 109 37.6
THA.LOC104814751 Tarenaya hassleriana HOM05D001916 ORTHO05D003272 2.1e-06 57.8 158 28.5
HPP92_009818 Vanilla planifolia HOM05D001916 ORTHO05D003272 2.7e-06 57.4 220 26.8
Potri.013G008400 Populus trichocarpa HOM05D001340 ORTHO05D005342 3.6e-06 57.0 133 35.3
Nn4g25585 Nelumbo nucifera HOM05D001340 ORTHO05D005342 6.1e-06 56.2 133 35.3
Glyma.10G003800 Glycine max HOM05D006451 ORTHO05D007680 8.0e-06 55.8 149 32.9
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 8.0e-06 55.8 154 32.5
Phvul.007G277400 Phaseolus vulgaris HOM05D006451 ORTHO05D007680 8.0e-06 55.8 155 32.9


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