Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 3.7e-123 444.9 223 100.0
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.0e-120 436.8 223 98.7
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.4e-109 399.8 224 90.2
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.7e-80 303.1 213 74.6
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.3e-71 272.3 226 65.0
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 7.0e-66 254.6 219 61.2
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 6.6e-64 248.1 220 60.0
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 3.8e-43 179.1 227 47.6
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 5.1e-40 168.7 224 49.1
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 3.3e-39 166.0 232 44.0
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 7.3e-39 164.9 233 42.1
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 8.9e-37 157.9 221 45.2
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 3.4e-36 156.0 233 45.1
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 9.9e-36 154.5 238 43.7
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 4.2e-34 149.1 220 43.2
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 5.4e-34 148.7 235 40.9
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.6e-33 145.6 231 39.0
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 4.6e-33 145.6 233 39.5
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.0e-32 144.4 145 57.2
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 6.6e-32 141.7 231 37.2
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.9e-31 140.2 205 42.0
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 2.5e-31 139.8 208 42.3
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.3e-30 137.5 231 39.8
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.6e-30 137.1 228 39.9
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 2.8e-30 136.3 229 37.6
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 3.6e-30 136.0 235 36.2
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 6.2e-30 135.2 220 37.7
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.1e-29 134.4 181 46.4
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.8e-29 133.7 179 45.8
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 2.4e-29 133.3 278 35.3
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 3.1e-29 132.9 224 41.5
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 3.1e-29 132.9 153 47.7
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 5.3e-29 132.1 218 39.9
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 9.0e-29 131.3 177 47.5
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 9.0e-29 131.3 228 39.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 1.2e-28 131.0 235 39.6
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 1.5e-28 130.6 230 37.8
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 3.4e-28 129.4 218 39.4
PGSC0003DMG403023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.5e-28 129.0 72 90.3
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 4.5e-28 129.0 226 38.5
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 5.8e-28 128.6 229 38.9
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 5.8e-28 128.6 218 39.4
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 7.6e-28 128.3 218 39.0
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 7.6e-28 128.3 180 45.0
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.6e-28 128.3 218 39.9
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 7.6e-28 128.3 227 39.2
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 9.9e-28 127.9 180 43.9
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.3e-27 127.5 153 50.3
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 1.7e-27 127.1 218 38.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 2.2e-27 126.7 218 38.5
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.2e-27 126.7 218 43.6
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 2.9e-27 126.3 226 35.8
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 3.8e-27 125.9 229 38.9
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.9e-27 125.6 229 38.4
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 4.9e-27 125.6 220 40.0
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 8.4e-27 124.8 233 39.5
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.1e-26 124.4 145 51.7
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.1e-26 124.4 104 61.5
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 1.1e-26 124.4 228 38.2
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.4e-26 124.0 249 36.9
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.9e-26 123.6 144 50.7
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 4.2e-26 122.5 236 36.0
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 4.2e-26 122.5 182 38.5
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 4.2e-26 122.5 189 39.7
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 1.6e-25 120.6 249 36.1
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.5e-25 119.4 228 38.2
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 4.6e-25 119.0 220 36.8
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 7.9e-25 118.2 150 46.7
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 1.0e-24 117.9 229 37.6
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.0e-24 117.9 207 44.4
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 1.3e-24 117.5 156 41.7
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.8e-24 117.1 171 42.1
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 2.3e-24 116.7 231 33.8
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.9e-24 115.9 224 37.1
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.9e-24 115.9 226 38.5
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 6.7e-24 115.2 228 36.4
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.1e-23 114.4 94 61.7
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 1.5e-23 114.0 153 42.5
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 3.3e-23 112.8 135 48.1
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 4.3e-23 112.5 225 37.3
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 4.3e-23 112.5 218 39.0
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 5.6e-23 112.1 225 36.9
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 1.6e-22 110.5 102 54.9
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 2.8e-22 109.8 155 41.9
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.1e-21 107.8 226 36.7
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 3.1e-21 106.3 205 37.6
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 3.1e-21 106.3 218 35.3
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 3.1e-21 106.3 218 35.3
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 3.1e-21 106.3 240 34.6
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 9.0e-21 104.8 231 32.0
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.5e-20 104.0 159 40.3
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.5e-20 104.0 233 36.5
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 2.0e-20 103.6 238 36.1
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-20 103.6 101 50.5
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 5.8e-20 102.1 142 44.4
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 4.9e-19 99.0 236 34.7
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 6.0e-17 92.0 73 65.8
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 3.0e-16 89.7 86 54.7
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 1.8e-13 80.5 120 39.2
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.2e-12 77.8 78 43.6
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 7.9e-09 65.1 205 26.3
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 3.9e-08 62.8 51 49.0
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 5.7e-07 58.9 157 33.8
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 4.8e-06 55.8 73 35.6


User provided reference genes

Program Settings