Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g022670 Solanum pennellii HOM05D004056 ORTHO05D004894 1.7e-124 449.5 253 100.0
Solyc09g059510.3 Solanum lycopersicum HOM05D004056 ORTHO05D004894 4.8e-111 404.8 253 85.4
PGSC0003DMG400017485 Solanum tuberosum HOM05D004056 ORTHO05D004894 3.8e-108 395.2 253 89.7
CAN.G5.40 Capsicum annuum HOM05D004056 ORTHO05D004894 6.0e-106 387.9 253 82.2
Nitab4.5_0000045g0550 Nicotiana tabacum HOM05D004056 ORTHO05D004894 3.2e-99 365.5 254 86.6
Nitab4.5_0001161g0130 Nicotiana tabacum HOM05D004056 ORTHO05D004894 1.6e-98 363.2 255 79.6
Peaxi162Scf00068g00224 Petunia axillaris HOM05D004056 ORTHO05D004894 3.7e-87 325.5 238 78.2
Rhsim13G0047900 Rhododendron simsii HOM05D004056 ORTHO05D004894 2.3e-73 279.6 250 60.8
Dinv19168 Davidia involucrata HOM05D004056 ORTHO05D004894 1.1e-72 277.3 201 72.1
Lj1A89T71 Lonicera japonica HOM05D004056 ORTHO05D004894 2.0e-72 276.6 246 61.0
Rhsim01G0253300 Rhododendron simsii HOM05D004056 ORTHO05D004894 4.4e-72 275.4 248 60.9
Hma1.2p1_0226F.1_g095370 Hydrangea macrophylla HOM05D004056 ORTHO05D004894 1.7e-71 273.5 255 60.4
Cc01_g16690 Coffea canephora HOM05D004056 ORTHO05D004894 2.4e-70 269.6 201 71.1
Actinidia30050 Actinidia chinensis HOM05D004056 ORTHO05D004894 5.3e-70 268.5 255 58.8
Actinidia39428 Actinidia chinensis HOM05D004056 ORTHO05D004894 7.0e-70 268.1 255 59.2
Potri.002G246100 Populus trichocarpa HOM05D004056 ORTHO05D004894 1.2e-69 267.3 250 59.2
vmacro02784 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 2.0e-69 266.5 213 66.7
Sabra02G0187400 Salix brachista HOM05D004056 ORTHO05D004894 1.0e-68 264.2 250 58.4
vmacro14736 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 1.0e-68 264.2 248 59.3
Nn1g07984 Nelumbo nucifera HOM05D004056 ORTHO05D004894 2.9e-68 262.7 202 68.3
Dinv00576 Davidia involucrata HOM05D004056 ORTHO05D004894 3.8e-68 262.3 253 58.5
MBI07_g18993_MAGBIO Magnolia biondii HOM05D004056 ORTHO05D004894 3.8e-68 262.3 253 56.5
Oeu051533.1 Olea europaea HOM05D004056 ORTHO05D004894 3.8e-68 262.3 202 66.8
Thecc.01G219700 Theobroma cacao HOM05D004056 ORTHO05D004894 9.4e-67 257.7 202 66.8
MSTRG.18836 Avicennia marina HOM05D004056 ORTHO05D004894 2.1e-66 256.5 202 65.8
Cfa004161 Carpinus fangiana HOM05D004056 ORTHO05D004894 2.7e-66 256.1 255 57.6
Duzib138G1417 Durio zibethinus HOM05D004056 ORTHO05D004894 2.7e-66 256.1 202 67.3
COL.COLO4_34102 Corchorus olitorius HOM05D004056 ORTHO05D004894 3.6e-66 255.8 202 66.8
Duzib133G0422 Durio zibethinus HOM05D004056 ORTHO05D004894 4.7e-66 255.4 202 65.8
CDE09G0677 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 3.0e-65 252.7 202 65.8
Prupe.8G198700 Prunus persica HOM05D004056 ORTHO05D004894 5.2e-65 251.9 255 56.9
SalBow6G2821 Salvia bowleyana HOM05D004056 ORTHO05D004894 1.2e-64 250.8 202 64.9
SalBow6G5583 Salvia bowleyana HOM05D004056 ORTHO05D004894 1.2e-64 250.8 202 64.9
MSTRG.20969 Avicennia marina HOM05D004056 ORTHO05D004894 2.6e-64 249.6 202 62.9
CiPaw.01G050800 Carya illinoinensis HOM05D004056 ORTHO05D004894 9.7e-64 247.7 255 55.3
DCAR_012671 Daucus carota HOM05D004056 ORTHO05D004894 9.7e-64 247.7 202 63.9
Gohir.D07G205300 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.2e-63 246.5 204 63.7
Gorai.001G231300 Gossypium raimondii HOM05D004056 ORTHO05D004894 2.2e-63 246.5 204 63.7
Manes.13G049600 Manihot esculenta HOM05D004056 ORTHO05D004894 2.8e-63 246.1 202 64.4
Duzib211G0551 Durio zibethinus HOM05D004056 ORTHO05D004894 4.8e-63 245.4 202 63.4
Gorai.001G188300 Gossypium raimondii HOM05D004056 ORTHO05D004894 8.2e-63 244.6 202 64.9
Gorai.007G156300 Gossypium raimondii HOM05D004056 ORTHO05D004894 1.8e-62 243.4 202 62.9
Gohir.D11G145800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 2.4e-62 243.0 202 63.4
TWI36G0821 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 2.4e-62 243.0 250 53.2
Atru.chr6.1427 Acer truncatum HOM05D004056 ORTHO05D004894 3.1e-62 242.7 210 63.3
Gohir.A07G198800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 3.1e-62 242.7 204 63.2
CANSAT01G2574 Cannabis sativa HOM05D004056 ORTHO05D004894 4.1e-62 242.3 255 54.1
TWI18G1219 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 5.3e-62 241.9 202 62.4
Gohir.D07G164400 Gossypium hirsutum HOM05D004056 ORTHO05D004894 9.1e-62 241.1 202 63.9
Gohir.A07G093100 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.2e-61 240.7 202 64.9
Gohir.D07G097700 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.2e-61 240.7 202 64.9
Gohir.A11G139600 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.6e-61 240.4 202 61.9
TAR362G0687 Trochodendron aralioides HOM05D004056 ORTHO05D004894 2.0e-61 240.0 202 62.9
Gorai.001G105100 Gossypium raimondii HOM05D004056 ORTHO05D004894 2.7e-61 239.6 202 64.4
TAR636G0170 Trochodendron aralioides HOM05D004056 ORTHO05D004894 4.5e-61 238.8 202 61.9
Oeu057860.1 Olea europaea HOM05D004056 ORTHO05D004894 5.9e-61 238.4 189 66.1
Manes.12G047500 Manihot esculenta HOM05D004056 ORTHO05D004894 1.0e-60 237.7 250 53.6
CiPaw.02G023900 Carya illinoinensis HOM05D004056 ORTHO05D004894 1.7e-60 236.9 255 53.7
Migut.D02503 Erythranthe guttata HOM05D004056 ORTHO05D004894 3.8e-60 235.7 206 60.7
Ciclev10021891m.g Citrus clementina HOM05D004056 ORTHO05D004894 1.5e-59 233.8 215 59.1
FvH4_2g18520 Fragaria vesca HOM05D004056 ORTHO05D004894 1.9e-59 233.4 205 61.5
Dinv12647 Davidia involucrata HOM05D004056 ORTHO05D004894 2.5e-59 233.0 206 63.6
MSTRG.12776 Avicennia marina HOM05D004056 ORTHO05D004894 3.6e-58 229.2 200 60.0
Cpa.g.sc21.106 Carica papaya HOM05D004056 ORTHO05D004894 3.6e-58 229.2 218 56.9
VMungo1383G1286 Vigna mungo HOM05D004056 ORTHO05D004894 3.6e-58 229.2 202 60.9
HPP92_024244 Vanilla planifolia HOM05D004056 ORTHO05D004894 4.7e-58 228.8 204 60.3
Haze_15250 Corylus avellana HOM05D004056 ORTHO05D004894 6.1e-58 228.4 337 44.5
RcHm_v2.0_Chr6g0284081 Rosa chinensis HOM05D004056 ORTHO05D004894 1.0e-57 227.6 205 60.5
CDE02G4431 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 2.3e-57 226.5 202 62.4
Phvul.008G131500 Phaseolus vulgaris HOM05D004056 ORTHO05D004894 2.3e-57 226.5 203 60.1
MD10G1159600 Malus domestica HOM05D004056 ORTHO05D004894 6.8e-57 224.9 259 52.9
DCAR_018636 Daucus carota HOM05D004056 ORTHO05D004894 1.5e-56 223.8 206 58.3
SGA_v2.0_scaffold18G08335 Striga asiatica HOM05D004056 ORTHO05D004894 1.5e-56 223.8 244 53.7
arahy.Tifrunner.gnm1.ann1.8LB9ZD Arachis hypogaea HOM05D004056 ORTHO05D004894 2.0e-56 223.4 204 59.8
MD05G1171400 Malus domestica HOM05D004056 ORTHO05D004894 2.0e-56 223.4 255 52.9
Aqoxy5G00024 Aquilegia oxysepala HOM05D004056 ORTHO05D004894 5.7e-56 221.9 202 60.4
Lalb_Chr19g0125861 Lupinus albus HOM05D004056 ORTHO05D004894 5.7e-56 221.9 202 60.4
Sc17g0002100 Simmondsia chinensis HOM05D004056 ORTHO05D004894 2.2e-55 219.9 220 54.5
HPP92_006215 Vanilla planifolia HOM05D004056 ORTHO05D004894 3.7e-55 219.2 202 58.9
Medtr7g055857 Medicago truncatula HOM05D004056 ORTHO05D004894 2.4e-54 216.5 204 59.8
Os02g0499000 Oryza sativa ssp. japonica HOM05D004056 ORTHO05D004894 9.1e-54 214.5 204 58.3
CsaV3_7G026330 Cucumis sativus L. HOM05D004056 ORTHO05D004894 1.6e-53 213.8 202 57.9
Zm00001eb241420 Zea mays HOM05D004056 ORTHO05D004894 1.6e-53 213.8 204 57.4
Eucgr.K02136 Eucalyptus grandis HOM05D004056 ORTHO05D004894 4.5e-53 212.2 255 51.0
Lj3g0018087 Lotus japonicus HOM05D004056 ORTHO05D004894 7.7e-53 211.5 204 58.3
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.0e-52 211.1 196 59.2
FAN27G1039 Fragaria x ananassa HOM05D004056 ORTHO05D004894 1.7e-52 210.3 192 59.9
Migut.N00633 Erythranthe guttata HOM05D004056 ORTHO05D004894 2.9e-52 209.5 205 55.1
TPR.G11183 Trifolium pratense HOM05D004056 ORTHO05D004894 3.8e-52 209.1 210 57.1
arahy.Tifrunner.gnm1.ann1.2MPX2Y Arachis hypogaea HOM05D004056 ORTHO05D004894 5.0e-52 208.8 243 50.2
Psat3g149240 Pisum sativum HOM05D004056 ORTHO05D004894 5.0e-52 208.8 203 58.6
Sed0007046 Sechium edule HOM05D004056 ORTHO05D004894 5.0e-52 208.8 205 56.6
ClCG07G002100 Citrullus lanatus HOM05D004056 ORTHO05D004894 1.1e-51 207.6 211 55.5
ATR0561G205 Amborella trichopoda HOM05D004056 ORTHO05D004894 1.5e-51 207.2 203 55.7
Medtr8g012655 Medicago truncatula HOM05D004056 ORTHO05D004894 1.9e-51 206.8 209 57.9
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 4.2e-51 205.7 192 58.9
TAR365G1100 Trochodendron aralioides HOM05D004056 ORTHO05D004894 5.5e-51 205.3 242 50.0
EL10Ac7g17907 Beta vulgaris HOM05D004056 ORTHO05D004894 4.7e-50 202.2 226 52.7
MELO3C028860.2 Cucumis melo HOM05D004056 ORTHO05D004894 4.7e-50 202.2 253 47.4
CsaV3_3G030040 Cucumis sativus L. HOM05D004056 ORTHO05D004894 1.4e-49 200.7 206 56.3
unitig_736.g22344 Utricularia gibba HOM05D004056 ORTHO05D004894 1.4e-49 200.7 199 57.3
MELO3C022718.2 Cucumis melo HOM05D004056 ORTHO05D004894 1.8e-49 200.3 208 55.3
QL09p051117 Quercus lobata HOM05D004056 ORTHO05D004894 2.3e-49 199.9 298 43.0
Lsat_1_v5_gn_5_180841 Lactuca sativa HOM05D004056 ORTHO05D004894 5.2e-49 198.7 205 57.1
VMungo0331G1907 Vigna mungo HOM05D004056 ORTHO05D004894 1.2e-48 197.6 202 55.0
HanXRQChr01g0015301 Helianthus annuus HOM05D004056 ORTHO05D004894 2.6e-48 196.4 200 58.5
Lsat_1_v5_gn_8_89300 Lactuca sativa HOM05D004056 ORTHO05D004894 2.6e-48 196.4 202 56.9
Ca_23224_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 1.7e-47 193.7 209 52.2
TAR633G1317 Trochodendron aralioides HOM05D004056 ORTHO05D004894 2.2e-47 193.4 140 71.4
Gohir.A07G160800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 3.7e-47 192.6 155 67.1
Lj1g0006098 Lotus japonicus HOM05D004056 ORTHO05D004894 3.7e-47 192.6 202 54.0
PGR044G2021 Punica granatum HOM05D004056 ORTHO05D004894 8.3e-47 191.4 202 55.0
Sed0026975 Sechium edule HOM05D004056 ORTHO05D004894 8.3e-47 191.4 187 55.6
ClCG09G008620 Citrullus lanatus HOM05D004056 ORTHO05D004894 3.1e-46 189.5 185 56.2
TPR.G6483 Trifolium pratense HOM05D004056 ORTHO05D004894 1.6e-45 187.2 204 52.9
GSVIVG01003250001 Vitis vinifera HOM05D004056 ORTHO05D004894 2.0e-45 186.8 162 61.1
THA.LOC104804624 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 2.7e-45 186.4 218 50.5
MD10G1039600 Malus domestica HOM05D001916 ORTHO05D004894 3.5e-45 186.0 212 51.4
unitig_26.g9438 Utricularia gibba HOM05D004056 ORTHO05D004894 3.5e-45 186.0 204 53.4
unitig_899.g15016 Utricularia gibba HOM05D004056 ORTHO05D004894 5.9e-45 185.3 202 53.0
HanXRQChr04g0108001 Helianthus annuus HOM05D004056 ORTHO05D004894 1.7e-44 183.7 202 53.5
Ca_03473_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 2.9e-44 183.0 212 52.8
Glyma.08G348300 Glycine max HOM05D004056 ORTHO05D004894 2.9e-44 183.0 202 51.0
AUR62016545 Chenopodium quinoa HOM05D004056 ORTHO05D004894 5.0e-44 182.2 221 48.0
ECA248G0601 Erigeron canadensis HOM05D004056 ORTHO05D004894 5.0e-44 182.2 201 53.2
CARHR218370 Cardamine hirsuta HOM05D004056 ORTHO05D004894 1.1e-43 181.0 212 50.0
AUR62001134 Chenopodium quinoa HOM05D004056 ORTHO05D004894 1.1e-43 181.0 222 47.7
BcaB04g17724 Brassica carinata HOM05D004056 ORTHO05D004894 1.9e-43 180.3 218 49.1
AL9U11310 Arabidopsis lyrata HOM05D004056 ORTHO05D004894 5.6e-43 178.7 216 48.1
Hund05580 Selenicereus undatus HOM05D004056 ORTHO05D004894 1.2e-42 177.6 212 48.1
Thhalv10026242m.g Eutrema salsugineum HOM05D004056 ORTHO05D004894 1.6e-42 177.2 227 47.1
BraA08t32730Z Brassica rapa HOM05D004056 ORTHO05D004894 2.8e-42 176.4 215 47.9
unitig_699.g19750 Utricularia gibba HOM05D004056 ORTHO05D004894 4.7e-42 175.6 207 49.8
Sp7g10210 Schrenkiella parvula HOM05D004056 ORTHO05D004894 6.1e-42 175.3 218 46.8
unitig_749.g13591 Utricularia gibba HOM05D004056 ORTHO05D004894 1.8e-41 173.7 136 64.0
C08p08780 Brassica napus HOM05D004056 ORTHO05D004894 3.0e-41 172.9 218 48.2
A08p07180 Brassica napus HOM05D004056 ORTHO05D004894 5.2e-41 172.2 215 47.4
BcaC07g37403 Brassica carinata HOM05D004056 ORTHO05D004894 6.8e-41 171.8 218 47.7
BolC8t47725H Brassica oleracea HOM05D004056 ORTHO05D004894 6.8e-41 171.8 218 47.7
PSO063G1373 Papaver somniferum HOM05D004056 ORTHO05D004894 1.5e-40 170.6 204 49.5
Hund18433 Selenicereus undatus HOM05D004056 ORTHO05D004894 7.5e-40 168.3 206 46.6
PSO017G4055 Papaver somniferum HOM05D004056 ORTHO05D004894 1.7e-39 167.2 202 48.5
Aa31LG9G5020 Aethionema arabicum HOM05D004056 ORTHO05D004894 7.8e-37 158.3 133 61.7
Sed0002122 Sechium edule HOM05D004056 ORTHO05D004894 7.8e-37 158.3 155 56.1
SMO172G0031 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 2.3e-36 156.8 114 64.9
Ah.08g214620 Amaranthus hybridus HOM05D004056 ORTHO05D004894 8.6e-36 154.8 210 47.1
AT4G13040 Arabidopsis thaliana HOM05D004056 ORTHO05D004894 2.5e-35 153.3 114 67.5
Pp3c6_9830 Physcomitrium patens HOM05D004056 ORTHO05D004894 4.3e-35 152.5 116 63.8
Glyma.18G159900 Glycine max HOM05D004056 ORTHO05D004894 2.1e-34 150.2 104 70.2
THA.LOC104808796 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 3.1e-33 146.4 208 45.2
Pp3c5_19550 Physcomitrium patens HOM05D004056 ORTHO05D004894 4.0e-33 146.0 116 62.9
SGA_v2.0_scaffold6G03510 Striga asiatica HOM05D004056 ORTHO05D004894 2.0e-32 143.7 103 68.0
Psat4g203800 Pisum sativum HOM05D004056 ORTHO05D004894 9.8e-32 141.4 156 55.1
C08p08770 Brassica napus HOM05D004056 ORTHO05D004894 3.0e-28 129.8 96 66.7
BolC8t47724H Brassica oleracea HOM05D004056 ORTHO05D004894 3.0e-28 129.8 96 66.7
Carub.0007s2973 Capsella rubella HOM05D004056 ORTHO05D004894 6.6e-28 128.6 174 44.8
ECA236G1380 Erigeron canadensis HOM05D004056 ORTHO05D004894 1.9e-27 127.1 96 63.5
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 4.7e-26 122.5 70 82.9
SMO361G0763 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 4.0e-25 119.4 154 46.1
HanXRQChr08g0235681 Helianthus annuus HOM05D004056 ORTHO05D004894 4.4e-24 115.9 93 61.3
HPP92_024205 Vanilla planifolia HOM05D004056 ORTHO05D004894 8.6e-20 101.7 204 35.3
CSS0004822 Camellia sinensis var. sinensis HOM05D004056 ORTHO05D004894 9.9e-16 88.2 94 53.2
CBR_g38383 Chara braunii HOM05D004056 ORTHO05D004894 5.4e-14 82.4 99 41.4
RcHm_v2.0_Chr3g0472871 Rosa chinensis HOM05D004056 ORTHO05D004894 2.8e-10 70.1 40 77.5
Pp3c4_8660 Physcomitrium patens HOM05D004056 ORTHO05D004504 1.1e-09 68.2 94 41.5
HanXRQChr12g0358981 Helianthus annuus HOM05D004056 ORTHO05D004894 3.4e-08 63.2 40 70.0
Pp3c13_22780 Physcomitrium patens HOM05D004056 ORTHO05D004504 9.9e-08 61.6 122 31.1
QL09p050907 Quercus lobata HOM05D004056 ORTHO05D004894 6.4e-07 58.9 94 39.4
Dinv28834 Davidia involucrata HOM05D004056 ORTHO05D183586 1.1e-06 58.2 79 41.8
CSS0002521 Camellia sinensis var. sinensis HOM05D004056 ORTHO05D004894 4.2e-06 56.2 35 74.3


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