Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g022450 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-55 218.8 115 100.0
CSS0002307 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-16 90.1 86 60.5
TWI14G0389 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.2e-16 90.1 115 47.8
Duzib133G0084 Durio zibethinus HOM05D000002 ORTHO05D000001 5.9e-16 87.8 115 47.0
Manes.01G044850 Manihot esculenta HOM05D000002 ORTHO05D000001 1.9e-14 82.8 115 51.3
PGSC0003DMG400013513 Solanum tuberosum HOM05D000002 ORTHO05D000001 3.2e-14 82.0 108 50.9
CSS0000291 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-14 81.3 73 60.3
Duzib138G1479 Durio zibethinus HOM05D000002 ORTHO05D000001 5.5e-14 81.3 78 59.0
Eucgr.B00919 Eucalyptus grandis HOM05D000002 ORTHO05D000001 7.2e-14 80.9 81 58.0
Eucgr.F00853 Eucalyptus grandis HOM05D000002 ORTHO05D000001 9.4e-14 80.5 81 58.0
Lj3g0008931 Lotus japonicus HOM05D000002 ORTHO05D000001 9.4e-14 80.5 104 48.1
Duzib211G0111 Durio zibethinus HOM05D000002 ORTHO05D000001 1.2e-13 80.1 78 57.7
THA.LOC104798816 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-13 80.1 79 57.0
THA.LOC104801932 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-13 80.1 78 57.7
Duzib235G0076 Durio zibethinus HOM05D000002 ORTHO05D000001 1.6e-13 79.7 78 57.7
PGR142G1019 Punica granatum HOM05D000002 ORTHO05D000001 1.6e-13 79.7 71 63.4
PGR142G1959 Punica granatum HOM05D000002 ORTHO05D000001 2.1e-13 79.3 112 50.9
GSVIVG01037631001 Vitis vinifera HOM05D000092 ORTHO05D000042 2.1e-13 79.3 92 50.0
CAN.G65.137 Capsicum annuum HOM05D000017 ORTHO05D010801 2.7e-13 79.0 73 63.0
Eucgr.C02847 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.7e-13 79.0 81 56.8
THA.LOC104804916 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.7e-13 79.0 109 44.0
GSVIVG01038695001 Vitis vinifera HOM05D000906 ORTHO05D000713 2.7e-13 79.0 92 50.0
Sopen09g027810 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-13 78.6 121 46.3
CSS0040477 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-13 77.8 115 42.6
Eucgr.K03052 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.1e-13 77.8 81 56.8
Sopen02g010710 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-13 77.8 114 50.0
CAN.G27.29 Capsicum annuum HOM05D001659 ORTHO05D001659 7.9e-13 77.4 112 46.4
THA.LOC104808467 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.9e-13 77.4 104 44.2
CsaV3_5G024630 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.0e-12 77.0 70 60.0
THA.LOC104821175 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-12 77.0 56 66.1
Ciclev10027035m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.8e-12 76.3 112 46.4
Eucgr.K03232 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.8e-12 76.3 116 45.7
CAN.G1337.33 Capsicum annuum HOM05D001608 ORTHO05D002070 3.9e-12 75.1 71 60.6
PGR004G1580 Punica granatum HOM05D000002 ORTHO05D000001 3.9e-12 75.1 120 45.0
Eucgr.C03442 Eucalyptus grandis HOM05D000002 ORTHO05D000001 5.1e-12 74.7 86 57.0
Eucgr.E01889 Eucalyptus grandis HOM05D000002 ORTHO05D000001 5.1e-12 74.7 73 57.5
Duzib205G0712 Durio zibethinus HOM05D000002 ORTHO05D000001 6.7e-12 74.3 78 53.8
Duzib116G0007 Durio zibethinus HOM05D000002 ORTHO05D000001 1.5e-11 73.2 115 44.3
Duzib128G0886 Durio zibethinus HOM05D000002 ORTHO05D000001 1.5e-11 73.2 70 57.1
Eucgr.L03606 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.5e-11 73.2 55 70.9
Duzib106G1217 Durio zibethinus HOM05D000002 ORTHO05D000001 2.0e-11 72.8 78 56.4
THA.LOC104800423 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.0e-11 72.8 105 44.8
CSS0016111 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-11 72.0 68 60.3
Ciclev10006567m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.3e-11 72.0 76 59.2
PGSC0003DMG400004238 Solanum tuberosum HOM05D000002 ORTHO05D000001 3.3e-11 72.0 81 48.1
THA.LOC104799859 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.3e-11 72.0 99 45.5
THA.LOC104825283 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.3e-11 72.0 115 39.1
THA.LOC109116397 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.3e-11 71.6 55 67.3
Eucgr.L01985 Eucalyptus grandis HOM05D000002 ORTHO05D000001 5.7e-11 71.2 111 45.0
THA.LOC104825922 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.4e-11 70.9 85 48.2
THA.LOC109116421 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.4e-11 70.9 85 48.2
Eucgr.L01126 Eucalyptus grandis HOM05D000002 ORTHO05D000001 9.7e-11 70.5 56 67.9
CAN.G1045.29 Capsicum annuum HOM05D000001 ORTHO05D010162 2.2e-10 69.3 56 62.5
Eucgr.F01722 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.8e-10 68.9 52 73.1
THA.LOC104806972 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.8e-10 68.9 70 51.4
Duzib084G1319 Durio zibethinus HOM05D000002 ORTHO05D000001 4.8e-10 68.2 114 44.7
Duzib160G0404 Durio zibethinus HOM05D000002 ORTHO05D000001 4.8e-10 68.2 86 50.0
Sopen02g005350 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-10 68.2 106 43.4
Sopen10g011840 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-10 68.2 91 50.5
Sopen01g025280 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-10 67.8 115 41.7
Sopen08g007750 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-10 67.8 115 41.7
PGR102G0819 Punica granatum HOM05D000002 ORTHO05D000001 8.2e-10 67.4 96 49.0
Ciclev10027307m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.1e-09 67.0 56 62.5
Sopen02g001520 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-09 67.0 115 40.9
Sopen12g010690 Solanum pennellii HOM05D000006 ORTHO05D000001 1.1e-09 67.0 71 52.1
TPR.G25983 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-09 67.0 70 52.9
VMungo1127G0557 Vigna mungo HOM05D000684 ORTHO05D000688 1.1e-09 67.0 96 45.8
ECA238G4725 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-09 66.2 71 49.3
Psat7g111080 Pisum sativum HOM05D000002 ORTHO05D000001 2.4e-09 65.9 91 45.1
GSVIVG01015124001 Vitis vinifera HOM05D000844 ORTHO05D000680 2.4e-09 65.9 56 60.7
CAN.G694.52 Capsicum annuum HOM05D000264 ORTHO05D000152 3.1e-09 65.5 65 55.4
Psat1g060800 Pisum sativum HOM05D000002 ORTHO05D000001 3.1e-09 65.5 91 46.2
PGR102G0702 Punica granatum HOM05D000002 ORTHO05D000001 3.1e-09 65.5 72 48.6
Sopen04g014610 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-09 65.5 67 53.7
TWI38G0170 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 3.1e-09 65.5 114 36.0
Duzib114G0941 Durio zibethinus HOM05D000002 ORTHO05D000001 4.1e-09 65.1 70 51.4
Sopen12g010600 Solanum pennellii HOM05D000006 ORTHO05D000001 4.1e-09 65.1 92 44.6
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 5.3e-09 64.7 71 52.1
Eucgr.I00145 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.9e-09 64.3 50 70.0
PGR031G0477 Punica granatum HOM05D000002 ORTHO05D000001 6.9e-09 64.3 62 56.5
PGR102G0886 Punica granatum HOM05D000002 ORTHO05D000001 6.9e-09 64.3 78 48.7
Ciclev10030401m.g Citrus clementina HOM05D000002 ORTHO05D000001 9.1e-09 63.9 73 47.9
PGR083G2178 Punica granatum HOM05D000002 ORTHO05D000001 1.2e-08 63.5 67 50.7
Sopen09g015420 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-08 63.2 70 48.6
ECA238G4755 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-08 62.8 109 37.6
GSVIVG01034745001 Vitis vinifera HOM05D000103 ORTHO05D000049 2.0e-08 62.8 114 37.7
PGR031G2479 Punica granatum HOM05D000002 ORTHO05D000001 2.6e-08 62.4 108 38.0
Ciclev10017902m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.4e-08 62.0 50 62.0
Sopen01g009970 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.0 71 50.7
TWI31G0090 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.4e-08 62.0 116 37.9
Cc11_g01430 Coffea canephora HOM05D000103 ORTHO05D000049 4.5e-08 61.6 66 47.0
TWI15G1219 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.5e-08 61.6 116 37.9
ECA232G1933 Erigeron canadensis HOM05D000153 ORTHO05D000118 7.7e-08 60.8 81 42.0
PGR004G1597 Punica granatum HOM05D000002 ORTHO05D000001 7.7e-08 60.8 62 59.7
Sopen08g006260 Solanum pennellii HOM05D000006 ORTHO05D000001 7.7e-08 60.8 55 52.7
THA.LOC104801877 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.7e-08 60.8 50 62.0
Atru.chr10.209 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-07 60.1 117 35.9
Duzib041G0290 Durio zibethinus HOM05D000002 ORTHO05D000001 1.3e-07 60.1 50 62.0
PGR042G1475 Punica granatum HOM05D000002 ORTHO05D000001 1.3e-07 60.1 52 57.7
CSS0004180 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 59.7 50 60.0
CAN.G22.52 Capsicum annuum HOM05D000121 ORTHO05D012651 2.2e-07 59.3 79 46.8
Gorai.009G388500 Gossypium raimondii HOM05D000397 ORTHO05D002023 2.2e-07 59.3 96 41.7
TWI38G0151 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.9e-07 58.9 114 33.3
Eucgr.G01578 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.8e-07 58.5 47 68.1
Psat2g029800 Pisum sativum HOM05D000002 ORTHO05D000001 8.5e-07 57.4 99 40.4
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 8.5e-07 57.4 61 50.8
TWI60G1612 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 8.5e-07 57.4 72 37.5
Eucgr.C03626 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-06 57.0 50 66.0
Eucgr.H01309 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-06 57.0 48 66.7
TWI09G1183 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.1e-06 57.0 112 33.9
PSO063G2871 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-06 56.6 120 33.3
TPR.G9293 Trifolium pratense HOM05D000002 ORTHO05D000001 1.9e-06 56.2 69 40.6
TWI15G1217 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.9e-06 56.2 112 34.8
PSO455G0014 Papaver somniferum HOM05D000002 ORTHO05D000001 2.5e-06 55.8 84 36.9
TWI79G0963 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.5e-06 55.8 115 31.3
TWI81G0517 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.5e-06 55.8 118 34.7
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 55.5 69 42.0
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 55.5 69 42.0
AUR62007698 Chenopodium quinoa HOM05D000087 ORTHO05D002585 3.2e-06 55.5 89 39.3
PSO782G1703 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-06 55.5 120 32.5
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-06 55.5 79 40.5
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-06 55.5 79 40.5
TPR.G40695 Trifolium pratense HOM05D000002 ORTHO05D000001 3.2e-06 55.5 87 35.6
Atru.chr4.412 Acer truncatum HOM05D000002 ORTHO05D000001 4.2e-06 55.1 70 40.0
Duzib213G0817 Durio zibethinus HOM05D000002 ORTHO05D000001 4.2e-06 55.1 63 47.6
Eucgr.C00972 Eucalyptus grandis HOM05D000002 ORTHO05D000001 4.2e-06 55.1 62 50.0
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-06 54.7 94 39.4
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-06 54.7 94 39.4
AUR62042771 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.2e-06 54.3 70 38.6
Dinv00781 Davidia involucrata HOM05D000002 ORTHO05D000001 7.2e-06 54.3 97 36.1
Duzib106G0529 Durio zibethinus HOM05D000002 ORTHO05D000001 7.2e-06 54.3 60 53.3
PSO801G0018 Papaver somniferum HOM05D000002 ORTHO05D000001 7.2e-06 54.3 120 32.5
EL10Ac1g01535 Beta vulgaris HOM05D000002 ORTHO05D000001 9.4e-06 53.9 73 42.5
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-06 53.9 69 40.6


User provided reference genes

Program Settings