Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g021900 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-99 364.4 186 100.0
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-62 241.9 175 70.9
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-62 241.5 175 71.4
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-61 239.6 175 70.3
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-61 237.7 175 69.7
Sopen03g010420 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-60 235.7 183 69.9
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-59 233.8 175 68.6
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-56 221.9 175 68.0
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 4.5e-50 201.8 165 65.5
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 8.5e-49 197.6 167 61.1
Sopen03g005290 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-45 185.7 166 62.0
Sopen04g005340 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-41 171.0 181 56.9
Sopen04g005320 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-39 164.9 180 56.1
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-38 162.2 127 66.1
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 1.2e-37 160.6 181 51.9
Sopen06g015160 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-35 151.4 126 62.7
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 5.0e-33 145.2 167 46.1
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-32 142.1 169 42.0
Manes.08G105950 Manihot esculenta HOM05D000002 ORTHO05D000001 5.7e-29 131.7 169 43.2
Migut.O00008 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.7e-26 122.9 164 41.5
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-23 112.1 78 71.8
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.4e-22 110.5 121 47.1
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 1.8e-22 110.2 98 59.2
Sopen02g012310 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-20 102.4 126 40.5
Manes.18G125450 Manihot esculenta HOM05D000002 ORTHO05D000001 4.9e-20 102.1 109 45.0
Sopen09g011210 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-20 101.3 119 40.3
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-19 99.4 155 34.2
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 4.1e-19 99.0 177 32.8
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 9.2e-19 97.8 162 36.4
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-18 94.7 78 61.5
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.5e-16 90.5 140 35.0
Sopen04g011370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-16 90.1 124 44.4
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 5.6e-16 88.6 181 30.9
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.8e-15 86.3 131 37.4
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-14 83.2 165 29.7
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 2.3e-14 83.2 142 31.7
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 3.1e-14 82.8 172 27.9
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-14 81.3 152 30.9
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 8.9e-14 81.3 159 32.1
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-13 80.9 171 29.2
Atru.chr13.2624 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-13 80.1 155 31.6
Migut.D01270 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.0e-13 80.1 76 48.7
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-13 80.1 130 33.1
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 2.0e-13 80.1 148 32.4
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-13 79.7 162 29.6
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-13 79.3 152 30.9
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-13 79.3 170 28.8
CAN.G1709.2 Capsicum annuum HOM05D000011 ORTHO05D000018 4.4e-13 79.0 103 36.9
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 4.4e-13 79.0 148 29.7
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 5.8e-13 78.6 97 44.3
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 7.5e-13 78.2 62 58.1
CAN.G352.76 Capsicum annuum HOM05D000002 ORTHO05D000001 9.8e-13 77.8 113 36.3
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.8e-13 77.8 130 30.8
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-12 77.4 170 30.6
Sopen01g027010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 137 32.1
Sopen06g032620 Solanum pennellii HOM05D000537 ORTHO05D000415 1.3e-12 77.4 48 77.1
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.2e-12 76.6 153 30.1
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.2e-12 76.6 153 30.1
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.2e-12 76.6 164 30.5
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 2.9e-12 76.3 151 30.5
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-12 76.3 145 30.3
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-12 75.5 147 29.9
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 8.3e-12 74.7 172 30.2
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-11 74.3 155 26.5
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-11 74.3 77 49.4
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-11 74.3 164 28.7
Dinv06735 Davidia involucrata HOM05D000002 ORTHO05D000001 1.4e-11 73.9 130 29.2
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-11 73.9 159 30.2
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-11 73.2 132 30.3
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 2.4e-11 73.2 160 30.6
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.2e-11 72.8 167 28.7
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 9.2e-11 71.2 146 30.8
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-10 70.9 157 28.0
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-10 70.1 156 27.6
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-10 70.1 155 28.4
Atru.chr2.2995 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-10 69.7 136 27.9
Psat3g090640 Pisum sativum HOM05D000002 ORTHO05D000001 2.7e-10 69.7 166 29.5
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.7e-10 69.7 151 28.5
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.7e-10 69.7 142 28.2
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.5e-10 69.3 134 31.3
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.6e-10 68.9 118 32.2
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.8e-10 68.2 61 49.2
Nitab4.5_0007134g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 7.8e-10 68.2 77 40.3
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-09 67.8 164 26.2
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-09 67.0 164 25.0
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.9e-09 65.9 133 33.8
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.0e-09 65.5 164 29.3
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.6e-09 65.1 159 28.3
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 8.6e-09 64.7 141 30.5
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 151 27.8
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.1e-08 64.3 154 25.3
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-08 64.3 153 31.4
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 64.3 148 31.8
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-08 63.9 143 27.3
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-08 63.9 145 27.6
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-08 63.9 141 24.8
Solyc06g082797.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.5e-08 63.9 148 30.4
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-08 63.5 178 27.0
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-08 63.5 155 26.5
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-08 63.5 136 25.7
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-08 63.2 164 26.2
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-08 63.2 166 25.3
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-08 62.8 157 24.2
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 3.3e-08 62.8 173 24.9
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.3e-08 62.8 149 32.9
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.3e-08 62.4 149 28.9
Sopen01g012660 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-08 62.4 78 42.3
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.3e-08 62.4 136 27.9
Atru.chr7.437 Acer truncatum HOM05D000002 ORTHO05D000001 5.6e-08 62.0 186 25.3
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-08 62.0 96 30.2
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.6e-08 62.0 129 28.7
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 5.6e-08 62.0 147 25.9
THA.LOC109116754 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.6e-08 62.0 180 28.3
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-08 61.6 103 30.1
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 7.3e-08 61.6 149 24.8
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.3e-08 61.6 166 25.3
VMungo1080G0955 Vigna mungo HOM05D000002 ORTHO05D000001 7.3e-08 61.6 149 28.9
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-08 61.2 157 24.2
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.8 157 24.2
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 1.2e-07 60.8 147 25.9
Prupe.8G185100 Prunus persica HOM05D000002 ORTHO05D000001 1.2e-07 60.8 139 28.8
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 60.5 158 27.8
MD15G1119400 Malus domestica HOM05D000056 ORTHO05D000001 1.6e-07 60.5 119 28.6
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 1.6e-07 60.5 143 25.9
Rhsim06G0171300 Rhododendron simsii HOM05D001152 ORTHO05D000967 1.6e-07 60.5 154 26.0
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-07 60.5 136 26.5
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 2.1e-07 60.1 100 33.0
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 2.1e-07 60.1 147 25.9
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 60.1 78 46.2
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-07 59.7 157 24.2
Duzib205G0987 Durio zibethinus HOM05D000002 ORTHO05D000001 2.8e-07 59.7 178 28.7
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.8e-07 59.7 144 25.7
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 2.8e-07 59.7 143 25.2
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 59.3 36 75.0
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.6e-07 59.3 139 23.7
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-07 58.9 151 27.8
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.7e-07 58.9 138 25.4
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-07 58.5 157 22.9
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-07 58.5 98 28.6
Rhsim02G0181800 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.2e-07 58.5 154 24.7
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-07 58.2 137 27.0
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 8.0e-07 58.2 165 25.5
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-07 58.2 138 26.8
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.8 157 22.9
Prupe.2G074700 Prunus persica HOM05D000002 ORTHO05D000001 1.1e-06 57.8 133 27.8
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.8 147 29.9
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 57.4 153 25.5
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.4 35 77.1
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-06 57.0 110 30.0
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-06 57.0 119 27.7
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-06 56.6 134 24.6
Sopen08g012970 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 56.6 133 32.3
TWI77G0666 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.3e-06 56.6 86 31.4
Atru.chr4.210 Acer truncatum HOM05D000002 ORTHO05D000001 3.1e-06 56.2 136 25.0
Solyc10g038180.3 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.1e-06 56.2 130 32.3
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 4.0e-06 55.8 139 27.3
ECA232G3484 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-06 55.8 159 25.2
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 4.0e-06 55.8 145 29.0
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 4.0e-06 55.8 162 26.5
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.8 142 28.2
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 4.0e-06 55.8 94 26.6
CSS0014384 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 55.5 145 27.6
Hma1.2p1_0179F.1_g079390 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.2e-06 55.5 107 31.8
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.2e-06 55.5 142 26.1
Solyc05g050070.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.2e-06 55.5 169 27.8
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.8e-06 55.1 130 26.2
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-06 54.7 126 26.2
Rhsim04G0020900 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.9e-06 54.7 148 25.7


User provided reference genes

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