Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g015050 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-29 132.5 69 100.0
Sopen09g020810 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-29 132.5 69 100.0
Sopen10g016590 Solanum pennellii HOM05D004182 ORTHO05D007321 8.9e-28 126.3 69 95.7
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 2.9e-26 121.3 68 91.2
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 2.9e-26 121.3 68 91.2
arahy.Tifrunner.gnm1.ann1.TV6F30 Arachis hypogaea HOM05D004182 ORTHO05D007321 2.9e-26 121.3 68 91.2
BcaC04g20782 Brassica carinata HOM05D004182 ORTHO05D007321 3.8e-26 120.9 69 92.8
CARHR282390 Cardamine hirsuta HOM05D004182 ORTHO05D007321 3.8e-26 120.9 69 92.8
CARHR282490 Cardamine hirsuta HOM05D004182 ORTHO05D007321 3.8e-26 120.9 69 92.8
BolSC29t60499H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BolSC47t61059H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-26 120.6 68 92.6
arahy.Tifrunner.gnm1.ann1.UTH6FS Arachis hypogaea HOM05D004182 ORTHO05D007321 6.4e-26 120.2 69 89.9
Nn064s42221 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-25 119.4 69 92.8
Nn349s46475 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-25 119.4 69 92.8
Nn403s46571 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-25 119.4 69 92.8
Nn4g25379 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-25 119.4 69 92.8
arahy.Tifrunner.gnm1.ann1.04MME8 Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-25 118.6 68 89.7
arahy.Tifrunner.gnm1.ann1.MI7UCB Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-25 118.6 68 89.7
arahy.Tifrunner.gnm1.ann1.NV4G0I Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-25 118.6 69 89.9
BraSC58t46455Z Brassica rapa HOM05D004182 ORTHO05D007321 3.2e-25 117.9 68 91.2
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 7.1e-25 116.7 68 91.2
Lsat_1_v5_gn_0_47640 Lactuca sativa HOM05D004182 ORTHO05D007321 7.1e-25 116.7 69 91.3
arahy.Tifrunner.gnm1.ann1.73L6LP Arachis hypogaea HOM05D004182 ORTHO05D007321 9.2e-25 116.3 69 88.4
Gohir.1Z051066 Gossypium hirsutum HOM05D004182 ORTHO05D007321 9.2e-25 116.3 69 89.9
Gohir.A04G039255 Gossypium hirsutum HOM05D004182 ORTHO05D007321 9.2e-25 116.3 69 89.9
Gohir.1Z049982 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.2e-24 115.9 69 88.4
Nn031s41606 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.7e-24 114.8 70 91.4
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 3.5e-24 114.4 68 89.7
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 4.6e-24 114.0 68 86.8
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 4.6e-24 114.0 68 86.8
Gohir.A12G165450 Gossypium hirsutum HOM05D004182 ORTHO05D007321 7.8e-24 113.2 69 88.4
BraSC179t45780Z Brassica rapa HOM05D004182 ORTHO05D007321 1.0e-23 112.8 64 92.2
EL10Ac7g17372 Beta vulgaris HOM05D004182 ORTHO05D007321 1.3e-23 112.5 69 87.0
EL10As10g23966 Beta vulgaris HOM05D004182 ORTHO05D007321 1.3e-23 112.5 69 87.0
Psat7g033600 Pisum sativum HOM05D004182 ORTHO05D007321 1.3e-23 112.5 69 88.4
Hma1.2p1_1418F.1_g282260 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 2.3e-23 111.7 69 87.0
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 3.9e-23 110.9 68 86.8
PGSC0003DMG400043035 Solanum tuberosum HOM05D004182 ORTHO05D007321 3.9e-23 110.9 63 95.2
arahy.Tifrunner.gnm1.ann1.8WTZ4N Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-22 108.6 63 88.9
Hma1.2p1_0043F.1_g025830 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 5.6e-22 107.1 68 79.4
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 7.3e-22 106.7 69 82.6
Nn219s45281 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.3e-22 106.7 62 91.9
Nn442s46688 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.3e-22 106.7 62 91.9
Psat0s2011g0080 Pisum sativum HOM05D004182 ORTHO05D007321 7.3e-22 106.7 67 85.1
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 1.6e-21 105.5 67 83.6
CARHR044290 Cardamine hirsuta HOM05D004182 ORTHO05D007321 4.7e-21 104.0 61 88.5
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 1.8e-20 102.1 68 80.9
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 4.0e-20 100.9 57 89.5
PGSC0003DMG400027964 Solanum tuberosum HOM05D004182 ORTHO05D007321 5.2e-20 100.5 59 89.8
PGSC0003DMG400027965 Solanum tuberosum HOM05D004182 ORTHO05D007321 6.9e-20 100.1 58 89.7
PGSC0003DMG400041917 Solanum tuberosum HOM05D004182 ORTHO05D007321 6.9e-20 100.1 58 89.7
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 8.9e-20 99.8 68 77.9
Gohir.D05G169433 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.2e-19 99.4 69 81.2
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.4e-19 97.8 68 77.9
Hma1.2p1_0594F.1_g185812 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 3.4e-19 97.8 68 77.9
EL10Ac8g19701 Beta vulgaris HOM05D004182 ORTHO05D007321 7.6e-19 96.7 63 82.5
arahy.Tifrunner.gnm1.ann1.GMF9U8 Arachis hypogaea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
Glyma.09G133950 Glycine max HOM05D004182 ORTHO05D007321 9.9e-19 96.3 69 72.5
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 2.2e-18 95.1 70 75.7
Sed0007203 Sechium edule HOM05D004182 ORTHO05D007321 2.2e-18 95.1 69 76.8
Sed0018388 Sechium edule HOM05D004182 ORTHO05D007321 2.2e-18 95.1 69 76.8
Sed0018833 Sechium edule HOM05D004182 ORTHO05D007321 2.2e-18 95.1 69 76.8
Sed0022676 Sechium edule HOM05D004182 ORTHO05D007321 2.2e-18 95.1 69 76.8
Nn070s42382 Nelumbo nucifera HOM05D004182 ORTHO05D007321 8.4e-18 93.2 58 86.2
Cpa.g.c43052.1 Carica papaya HOM05D004182 ORTHO05D007321 1.1e-17 92.8 58 84.5
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.1e-17 92.8 68 75.0
Gohir.D13G041550 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.4e-17 92.4 69 73.9
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 1.9e-17 92.0 67 77.6
SHI36542 Sapria himalayana HOM05D004182 ORTHO05D007321 3.2e-17 91.3 69 75.4
arahy.Tifrunner.gnm1.ann1.5LT2YD Arachis hypogaea HOM05D000580 ORTHO05D007321 1.2e-16 89.4 65 72.3
Nn029s41584 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.6e-16 89.0 58 82.8
Nn212s45203 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.6e-16 89.0 58 82.8
Nn264s45947 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.6e-16 89.0 58 82.8
Nn304s46229 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.6e-16 89.0 58 82.8
Sc14g0004760 Simmondsia chinensis HOM05D004182 ORTHO05D007321 3.5e-16 87.8 63 79.4
Glyma.09G164000 Glycine max HOM05D004182 ORTHO05D007321 4.6e-16 87.4 55 83.6
Sed0024115 Sechium edule HOM05D004182 ORTHO05D007321 4.6e-16 87.4 69 72.5
Phvul.010G003500 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 3.0e-15 84.7 69 69.6
Sc03g0005670 Simmondsia chinensis HOM05D004182 ORTHO05D007321 3.0e-15 84.7 58 79.3
Sc21g0003840 Simmondsia chinensis HOM05D004182 ORTHO05D007321 3.9e-15 84.3 58 79.3
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 8.7e-15 83.2 45 93.3
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.1e-14 82.8 58 77.6
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 1.5e-14 82.4 42 97.6
CAN.G1119.15 Capsicum annuum HOM05D002978 ORTHO05D003339 1.5e-14 82.4 62 72.6
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.5e-14 82.4 58 75.9
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 1.9e-14 82.0 45 91.1
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 9.6e-14 79.7 49 87.8
arahy.Tifrunner.gnm1.ann1.096T0J Arachis hypogaea HOM05D004182 ORTHO05D007321 2.1e-13 78.6 67 64.2
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-13 78.6 46 91.3
HPP92_028384 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.1e-13 76.6 49 87.8
HPP92_028405 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.1e-13 76.6 49 87.8
HPP92_028414 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.1e-13 76.6 49 87.8
HPP92_028420 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.1e-13 76.6 49 87.8
HPP92_028429 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.1e-13 76.6 49 87.8
HPP92_028433 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.1e-13 76.6 49 87.8
Phvul.010G035850 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 3.1e-12 74.7 51 78.4
Sed0012210 Sechium edule HOM05D004182 ORTHO05D007321 4.0e-12 74.3 70 64.3
Nn6g32823 Nelumbo nucifera HOM05D004182 ORTHO05D007321 5.3e-12 73.9 65 69.2
Nn8g40575 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.0e-11 72.0 48 81.2
BcaC05g26432 Brassica carinata HOM05D004182 ORTHO05D007321 2.2e-10 68.6 58 67.2
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 3.8e-10 67.8 36 100.0
Migut.I00342 Erythranthe guttata HOM05D004182 ORTHO05D007321 1.4e-09 65.9 38 94.7
ECA247G0006 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-09 64.3 49 71.4
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-08 62.8 33 100.0
Psat3g186560 Pisum sativum HOM05D001387 ORTHO05D001250 1.6e-08 62.4 48 75.0
Phvul.003G041600 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 2.1e-08 62.0 49 71.4
Phvul.010G068400 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 2.7e-08 61.6 48 72.9
Ciclev10010312m.g Citrus clementina HOM05D000071 ORTHO05D000029 8.7e-07 56.6 37 83.8
Glyma.03G084500 Glycine max HOM05D004182 ORTHO05D007321 1.5e-06 55.8 43 76.7
Cpa.g.sc76.14 Carica papaya HOM05D004182 ORTHO05D007321 3.3e-06 54.7 33 78.8
Phvul.010G151800 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 9.6e-06 53.1 69 52.2


User provided reference genes

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