Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g017060 Solanum pennellii HOM05D010431 ORTHO05D016891 1.2e-162 576.6 338 100.0
Sopen01g032040 Solanum pennellii HOM05D010431 ORTHO05D016891 4.1e-41 172.9 443 39.5
Sopen04g023140 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-40 170.2 135 71.9
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.2e-39 167.2 270 43.3
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 3.8e-39 166.4 332 46.1
Sopen03g016300 Solanum pennellii HOM05D010431 ORTHO05D016891 1.9e-38 164.1 89 91.0
PGSC0003DMG400017333 Solanum tuberosum HOM05D010431 ORTHO05D016891 3.2e-38 163.3 133 67.7
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 1.8e-33 147.5 96 82.3
Solyc03g096700.3 Solanum lycopersicum HOM05D010431 ORTHO05D010855 3.2e-30 136.7 93 79.6
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 2.4e-25 120.6 174 51.7
PGSC0003DMG400036592 Solanum tuberosum HOM05D010431 ORTHO05D016891 4.5e-24 116.3 355 35.8
Sopen04g023590 Solanum pennellii HOM05D010431 ORTHO05D030636 9.4e-22 108.6 268 42.9
PGSC0003DMG400037601 Solanum tuberosum HOM05D010431 ORTHO05D016891 9.4e-22 108.6 75 70.7
Sopen10g015690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-17 95.1 272 42.3
Solyc04g051787.1 Solanum lycopersicum HOM05D010431 ORTHO05D016891 1.7e-15 87.8 48 83.3
Solyc02g031700.3 Solanum lycopersicum HOM05D010431 ORTHO05D030636 2.5e-14 84.0 87 56.3
Solyc04g054147.1 Solanum lycopersicum HOM05D010431 ORTHO05D030636 6.1e-13 79.3 156 39.1
Sopen02g009950 Solanum pennellii HOM05D010431 ORTHO05D030636 8.9e-12 75.5 72 65.3
Solyc11g065330.1 Solanum lycopersicum HOM05D010431 ORTHO05D010855 2.2e-10 70.9 51 72.5
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 6.3e-10 69.3 93 50.5
CAN.G69.25 Capsicum annuum HOM05D010431 ORTHO05D016891 9.2e-09 65.5 45 68.9
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 9.2e-09 65.5 89 43.8
PGSC0003DMG400037047 Solanum tuberosum HOM05D022799 ORTHO05D026034 9.2e-09 65.5 169 33.1
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 1.2e-08 65.1 89 43.8
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-08 64.7 90 41.1
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-08 64.3 90 41.1
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-08 64.3 90 41.1
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-08 64.3 90 41.1
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-08 64.3 90 41.1
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-08 64.3 90 41.1
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-08 64.3 90 41.1
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.7e-08 63.9 82 40.2
Solyc08g061275.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 3.5e-08 63.5 75 48.0
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-08 63.5 76 43.4
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 3.5e-08 63.5 76 43.4
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 3.5e-08 63.5 76 43.4
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 3.5e-08 63.5 76 43.4
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 4.5e-08 63.2 81 42.0
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-08 63.2 89 40.4
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 5.9e-08 62.8 76 43.4
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-08 62.8 76 43.4
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 7.8e-08 62.4 73 43.8
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.0e-07 62.0 280 32.9
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.0e-07 62.0 90 40.0
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.3e-07 61.6 76 42.1
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 1.3e-07 61.6 90 40.0
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 1.3e-07 61.6 90 40.0
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 1.7e-07 61.2 89 41.6
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 1.7e-07 61.2 90 40.0
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-07 61.2 91 39.6
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-07 61.2 96 39.6
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.7e-07 61.2 82 39.0
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.3e-07 60.8 87 42.5
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-07 60.8 95 38.9
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.9e-07 60.5 90 40.0
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-07 60.5 110 38.2
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 2.9e-07 60.5 204 28.4
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-07 60.1 89 39.3
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 3.8e-07 60.1 76 42.1
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 6.6e-07 59.3 83 41.0
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 6.6e-07 59.3 94 40.4
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 6.6e-07 59.3 90 38.9
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 8.6e-07 58.9 76 42.1
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 1.1e-06 58.5 89 39.3
PGSC0003DMG400040922 Solanum tuberosum HOM05D010431 ORTHO05D009909 1.9e-06 57.8 40 70.0
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 2.5e-06 57.4 99 39.4
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 2.5e-06 57.4 91 40.7
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 3.3e-06 57.0 90 40.0
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 3.3e-06 57.0 75 40.0
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 4.3e-06 56.6 85 36.5
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.6e-06 56.2 232 29.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 5.6e-06 56.2 91 39.6
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 7.3e-06 55.8 99 38.4
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 9.5e-06 55.5 76 40.8
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 9.5e-06 55.5 92 37.0


User provided reference genes

Program Settings