Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g016260 Solanum pennellii HOM05D008291 ORTHO05D000669 1.9e-37 158.7 80 100.0
Solyc12g038430.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 8.5e-30 133.3 86 82.6
Solyc12g082720.1 Solanum lycopersicum HOM05D008291 ORTHO05D003568 7.2e-29 130.2 86 81.4
Sopen09g022380 Solanum pennellii HOM05D008291 ORTHO05D000669 4.6e-28 127.5 86 79.1
CAN.G5.16 Capsicum annuum HOM05D008291 ORTHO05D003568 3.4e-23 111.3 86 68.6
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 5.5e-21 104.0 63 84.1
CAN.G661.2 Capsicum annuum HOM05D000062 ORTHO05D000043 3.0e-19 98.2 86 65.1
Sopen10g007560 Solanum pennellii HOM05D008291 ORTHO05D016169 5.0e-14 80.9 79 57.0
Solyc04g026060.1 Solanum lycopersicum HOM05D008291 ORTHO05D003568 1.7e-09 65.9 37 83.8
Lj2g0007253 Lotus japonicus HOM05D008291 ORTHO05D003568 8.2e-09 63.5 62 50.0
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 1.4e-08 62.8 62 48.4
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 1.8e-08 62.4 72 47.2
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 9.1e-08 60.1 76 43.4
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 1.6e-07 59.3 60 50.0
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 2.7e-07 58.5 75 44.0
TPR.G22591 Trifolium pratense HOM05D008291 ORTHO05D003568 4.5e-07 57.8 65 47.7
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 5.9e-07 57.4 72 45.8
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 5.9e-07 57.4 72 45.8
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 1.3e-06 56.2 68 47.1
Glyma.16G084900 Glycine max HOM05D008291 ORTHO05D003568 2.2e-06 55.5 63 49.2
TPR.G10058 Trifolium pratense HOM05D008291 ORTHO05D003568 2.9e-06 55.1 61 44.3
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 3.8e-06 54.7 71 45.1


User provided reference genes

Program Settings