Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.1e-138 496.5 235 100.0
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 2.9e-134 481.9 233 98.3
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 7.5e-127 457.2 238 93.3
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.1e-104 383.6 219 80.8
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.4e-104 383.3 229 77.7
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 7.6e-103 377.5 233 76.4
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 7.2e-69 264.6 225 55.6
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 7.9e-68 261.2 220 55.5
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.3e-67 260.4 234 55.1
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 6.7e-67 258.1 227 52.9
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.9e-66 256.5 221 54.8
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.3e-65 253.8 220 55.5
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.2e-63 247.3 220 53.6
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.7e-62 243.4 217 53.0
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 5.0e-62 241.9 220 53.6
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 7.2e-61 238.0 222 54.1
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 2.1e-60 236.5 217 51.2
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.7e-60 236.1 223 49.8
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 3.9e-59 232.3 216 52.8
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.1e-58 230.7 224 50.9
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 2.5e-58 229.6 223 49.8
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 2.5e-58 229.6 223 52.5
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 4.3e-58 228.8 221 50.7
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 9.7e-58 227.6 224 51.3
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 1.3e-57 227.3 225 49.8
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 1.3e-57 227.3 220 46.8
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 1.7e-57 226.9 217 50.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 2.2e-57 226.5 218 51.8
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 6.3e-57 224.9 218 51.8
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.1e-56 224.2 219 52.1
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.8e-56 223.4 223 50.2
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 2.4e-56 223.0 218 50.9
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 5.3e-56 221.9 219 52.5
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 9.1e-56 221.1 224 49.6
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.2e-55 220.7 225 48.0
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 3.4e-55 219.2 220 47.3
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 3.4e-55 219.2 229 46.7
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 4.5e-55 218.8 229 49.8
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 5.9e-55 218.4 222 49.5
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 5.9e-55 218.4 221 46.6
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 7.7e-55 218.0 214 49.5
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 1.0e-54 217.6 134 76.9
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.7e-54 216.9 219 48.9
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 2.2e-54 216.5 217 50.2
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 3.8e-54 215.7 222 47.7
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 6.5e-54 214.9 215 47.0
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 8.5e-54 214.5 221 48.9
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 8.5e-54 214.5 220 49.1
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.1e-53 214.2 217 48.8
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.4e-53 213.8 219 50.2
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 2.5e-53 213.0 224 50.4
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 4.2e-53 212.2 226 46.5
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.2e-52 210.7 232 47.8
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.2e-52 210.7 220 46.8
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.2e-52 210.7 214 49.1
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 1.6e-52 210.3 219 48.9
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 4.7e-52 208.8 232 46.1
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.0e-51 207.6 217 47.5
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.8e-51 206.8 223 46.2
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.8e-51 206.8 220 47.3
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.3e-51 206.5 220 47.3
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 3.9e-51 205.7 189 52.9
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 3.9e-51 205.7 227 44.9
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 5.1e-51 205.3 219 46.6
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 6.7e-51 204.9 226 44.7
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 8.8e-51 204.5 247 44.5
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.1e-50 204.1 219 47.0
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 2.0e-50 203.4 232 43.5
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 9.7e-50 201.1 224 46.4
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 9.7e-50 201.1 218 46.3
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.3e-49 200.7 221 46.6
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 1.7e-49 200.3 215 45.6
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 3.7e-49 199.1 228 42.5
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 8.2e-49 198.0 218 45.9
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.1e-48 197.6 215 47.9
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.1e-48 197.6 218 46.8
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-48 197.2 243 42.4
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.1e-48 195.7 139 62.6
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 5.3e-48 195.3 222 44.1
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 5.3e-48 195.3 217 45.6
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 2.2e-46 189.9 229 41.9
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 6.5e-46 188.3 218 45.0
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.7e-44 182.2 230 42.2
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.0e-43 181.0 137 60.6
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 2.3e-43 179.9 218 44.0
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 3.0e-43 179.5 137 60.6
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 5.2e-43 178.7 230 39.6
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 9.1e-40 167.9 139 51.8
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 5.0e-38 162.2 172 51.7
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.4e-35 154.1 220 36.8
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 3.0e-35 152.9 163 46.0
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 8.8e-35 151.4 217 35.9
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 1.7e-33 147.1 258 34.5
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 5.4e-32 142.1 189 38.1
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.9e-30 136.3 215 35.3
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.5e-29 134.0 103 59.2
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 3.6e-28 129.4 199 34.2
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 4.1e-24 115.9 212 32.1
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 2.7e-23 113.2 126 42.9
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 3.3e-21 106.3 149 39.6
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.7e-17 94.0 154 37.7
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 6.4e-17 92.0 93 44.1
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 9.2e-16 88.2 120 39.2
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.7e-14 84.0 105 37.1
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 3.0e-14 83.2 64 62.5
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 5.6e-13 79.0 193 32.6
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 5.4e-08 62.4 94 40.4
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 7.0e-08 62.0 97 30.9
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 2.0e-07 60.5 104 34.6
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 4.6e-07 59.3 94 38.3


User provided reference genes

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