Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-65 252.7 120 100.0
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-44 182.6 101 81.2
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 7.9e-40 167.2 108 72.2
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.6e-30 135.6 68 94.1
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 9.7e-30 133.7 101 62.4
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-28 129.8 107 58.9
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 4.5e-27 124.8 100 57.0
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-23 113.2 116 51.7
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-23 110.9 116 50.9
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-23 110.9 116 50.9
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.8e-23 110.5 54 88.9
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-22 109.4 101 54.5
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-22 108.6 52 90.4
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 2.2e-21 105.9 62 77.4
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-21 105.1 101 52.5
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-21 104.4 63 71.4
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 1.1e-20 103.6 105 51.4
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-20 103.6 101 53.5
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 5.3e-20 101.3 105 50.5
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-20 101.3 76 61.8
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 7.7e-19 97.4 110 43.6
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-18 97.1 57 82.5
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-18 97.1 100 48.0
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-18 95.9 53 73.6
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.1e-17 93.6 92 54.3
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.9e-17 92.8 82 53.7
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-17 92.4 54 70.4
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 7.2e-17 90.9 120 40.8
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-16 89.0 110 40.0
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 4.7e-16 88.2 107 40.2
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 6.1e-16 87.8 110 39.1
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 6.1e-16 87.8 110 39.1
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-16 87.8 54 66.7
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.0e-16 87.4 39 92.3
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-15 87.0 110 39.1
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 1.8e-15 86.3 110 38.2
Sopen02g008430 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-15 85.9 42 95.2
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 4.0e-15 85.1 107 38.3
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 5.2e-15 84.7 104 39.4
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 6.8e-15 84.3 110 38.2
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 7.5e-14 80.9 81 50.6
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 6.3e-13 77.8 65 55.4
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 8.3e-13 77.4 123 35.0
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 8.3e-13 77.4 37 86.5
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-12 77.0 122 36.1
Hund19819 Selenicereus undatus HOM05D009146 ORTHO05D011649 5.4e-12 74.7 94 44.7
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 5.4e-12 74.7 41 87.8
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 7.0e-12 74.3 102 38.2
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 9.1e-12 73.9 51 68.6
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 1.2e-11 73.6 92 39.1
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-11 72.8 86 43.0
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.7e-11 72.4 49 67.3
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.5e-11 72.0 80 42.5
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-11 71.2 36 83.3
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-10 70.5 52 55.8
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-10 70.5 52 55.8
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-10 70.1 54 61.1
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-10 69.7 79 40.5
AUR62037452 Chenopodium quinoa HOM05D000039 ORTHO05D007163 1.7e-10 69.7 123 33.3
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 1.7e-10 69.7 52 55.8
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 2.3e-10 69.3 52 57.7
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-10 68.6 75 42.7
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.0e-10 68.2 79 39.2
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-09 67.0 76 39.5
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 1.9e-09 66.2 72 40.3
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.9e-09 66.2 99 40.4
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 7.2e-09 64.3 72 43.1
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 9.5e-09 63.9 62 51.6
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-08 63.5 46 60.9
TWI36G1730 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.6e-08 63.2 79 41.8
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-08 62.4 72 41.7
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-08 62.0 52 50.0
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 3.6e-08 62.0 79 40.5
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 6.1e-08 61.2 104 33.7
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 1.0e-07 60.5 67 41.8
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 1.0e-07 60.5 95 31.6
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-07 60.1 37 64.9
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-07 59.3 62 41.9
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.0e-07 58.9 121 32.2
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 5.2e-07 58.2 93 33.3
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-07 58.2 31 87.1
Sopen01g033440 Solanum pennellii HOM05D003120 ORTHO05D003568 6.8e-07 57.8 110 30.9
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 6.8e-07 57.8 95 31.6
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 6.8e-07 57.8 110 31.8
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 2.0e-06 56.2 49 51.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.6e-06 55.8 32 81.2
Nitab4.5_0007164g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.4e-06 55.5 106 33.0
Hund29146 Selenicereus undatus HOM05D009146 ORTHO05D011649 4.4e-06 55.1 52 55.8
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.4e-06 55.1 65 40.0
AUR62024081 Chenopodium quinoa HOM05D003888 ORTHO05D003213 5.7e-06 54.7 66 40.9
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 7.5e-06 54.3 79 31.6
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 7.5e-06 54.3 79 31.6
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 7.5e-06 54.3 98 35.7
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.5e-06 54.3 109 29.4
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.5e-06 54.3 110 32.7
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 7.5e-06 54.3 45 48.9
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.5e-06 54.3 36 61.1


User provided reference genes

Program Settings