Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 2.4e-147 525.4 253 100.0
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 4.3e-144 514.6 253 98.0
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 9.3e-123 443.7 253 83.4
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 8.1e-119 430.6 253 81.4
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.6e-106 388.3 253 75.5
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 2.5e-104 382.5 222 82.4
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 3.3e-88 328.9 260 61.5
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 2.8e-87 325.9 249 64.7
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.8e-86 323.2 262 62.2
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.0e-84 317.4 260 61.2
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.0e-84 317.4 247 63.2
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 5.0e-84 315.1 259 59.5
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 6.5e-84 314.7 256 60.2
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 1.9e-83 313.2 259 59.8
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 6.1e-82 308.1 257 56.8
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.8e-81 306.6 247 60.7
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.8e-81 306.6 247 60.7
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.5e-80 303.5 254 61.0
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 2.0e-80 303.1 261 58.6
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 7.4e-80 301.2 261 59.4
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 1.7e-79 300.1 247 59.9
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 2.2e-79 299.7 259 54.8
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 3.7e-79 298.9 247 59.5
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 4.8e-79 298.5 267 56.9
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.1e-78 297.4 249 57.8
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 4.1e-78 295.4 254 57.5
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 3.4e-77 292.4 255 57.6
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.3e-76 290.4 253 56.9
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.4e-75 287.0 228 62.7
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 4.2e-75 285.4 252 56.0
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 9.4e-75 284.3 247 57.5
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.2e-74 283.9 138 96.4
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.6e-74 283.5 252 54.4
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 1.6e-74 283.5 254 54.3
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 8.8e-73 277.7 252 54.4
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-72 277.3 258 59.3
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 2.0e-72 276.6 258 59.3
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.3e-71 273.9 233 56.7
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 1.7e-71 273.5 263 53.2
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 3.7e-71 272.3 267 52.8
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.4e-70 269.6 374 42.2
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 2.4e-70 269.6 258 53.5
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 3.1e-70 269.2 270 50.4
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 3.1e-70 269.2 249 54.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.3e-68 263.8 254 51.6
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 3.8e-68 262.3 251 53.4
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 6.5e-68 261.5 253 51.8
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 8.5e-68 261.2 312 46.8
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.5e-67 260.4 245 55.5
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 2.5e-67 259.6 254 52.8
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 7.2e-67 258.1 255 51.8
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 6.7e-65 251.5 246 53.3
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.5e-64 250.4 255 51.0
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 4.4e-64 248.8 247 52.6
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 7.5e-64 248.1 248 52.0
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 9.7e-64 247.7 258 52.3
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.3e-63 247.3 210 59.0
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.7e-63 246.9 245 53.5
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 4.8e-63 245.4 266 47.7
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.4e-62 243.8 257 50.2
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 3.1e-62 242.7 247 49.4
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.6e-61 240.4 248 52.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.5e-61 239.2 246 50.4
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 5.9e-61 238.4 254 47.6
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.7e-60 236.9 251 49.0
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 2.2e-60 236.5 245 51.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.2e-60 236.5 262 47.7
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 3.8e-60 235.7 246 50.4
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.5e-59 233.8 256 46.9
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.9e-59 233.4 248 50.4
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 1.9e-59 233.4 247 49.0
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 1.9e-59 233.4 247 49.0
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 1.9e-59 233.4 247 49.0
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 7.2e-59 231.5 233 47.6
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 3.6e-58 229.2 199 60.3
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 6.1e-58 228.4 209 54.5
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.4e-57 227.3 201 57.2
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.6e-56 223.0 326 42.9
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 7.5e-56 221.5 283 42.4
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 2.8e-55 219.5 232 48.7
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 6.3e-55 218.4 163 62.6
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 8.3e-55 218.0 177 62.1
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.9e-52 209.5 238 49.2
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.5e-51 207.2 235 46.0
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 4.7e-50 202.2 243 48.6
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 4.0e-49 199.1 204 52.0
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 1.2e-48 197.6 259 45.9
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-46 191.0 259 44.0
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.4e-46 189.9 256 44.1
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.0e-44 184.5 271 39.1
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 3.7e-39 166.0 234 38.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 8.9e-33 144.8 153 52.3
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 4.4e-32 142.5 85 85.9
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 2.0e-29 133.7 245 36.7
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 6.2e-26 122.1 243 34.2
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.5e-24 117.5 141 48.2
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.4e-22 110.9 175 40.0
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 4.6e-21 105.9 199 30.7
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 4.6e-21 105.9 264 31.8
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.1e-19 101.3 218 33.9
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 3.6e-18 96.3 167 34.7
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 4.7e-18 95.9 133 42.1
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 6.4e-15 85.5 240 30.0
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 1.1e-06 58.2 37 70.3


User provided reference genes

Program Settings