Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g011670 Solanum pennellii HOM05D003150 ORTHO05D003532 2.7e-255 884.8 438 100.0
PGSC0003DMG400038090 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.8e-66 256.9 373 42.6
Sopen02g003900 Solanum pennellii HOM05D000014 ORTHO05D003532 2.9e-63 246.9 591 34.7
PGSC0003DMG400041052 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-60 238.4 199 61.3
PGSC0003DMG400040357 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.8e-56 222.6 174 65.5
PGSC0003DMG400034407 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.4e-55 219.2 217 52.1
PGSC0003DMG400034543 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.4e-55 219.2 325 41.2
PGSC0003DMG400045561 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-54 217.6 175 62.9
PGSC0003DMG400039928 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-53 213.4 203 55.2
PGSC0003DMG400040023 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-52 210.7 199 55.3
PGSC0003DMG400036090 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.8e-50 203.8 175 59.4
PGSC0003DMG400042345 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.1e-50 202.2 199 51.8
PGSC0003DMG400035949 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.3e-49 199.5 199 50.8
PGSC0003DMG400039726 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-44 183.7 142 64.8
PGSC0003DMG400039427 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-43 181.8 164 56.7
Sopen10g009330 Solanum pennellii HOM05D003150 ORTHO05D003532 7.4e-43 179.1 175 53.1
PGSC0003DMG400038538 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.2e-42 176.0 174 53.4
PGSC0003DMG400038726 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.2e-42 176.0 152 59.9
PGSC0003DMG400039734 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.1e-42 175.6 148 60.1
PGSC0003DMG400041853 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.1e-42 175.6 166 51.2
PGSC0003DMG400040997 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-41 174.9 175 54.3
PGSC0003DMG400045795 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.9e-39 166.4 148 57.4
PGSC0003DMG400046799 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-39 166.0 166 48.2
PGSC0003DMG400041444 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.4e-39 165.6 119 68.9
PGSC0003DMG400042690 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.4e-39 165.6 174 51.7
Sopen03g017120 Solanum pennellii HOM05D003150 ORTHO05D003532 7.1e-38 162.5 326 36.8
PGSC0003DMG400034750 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.0e-37 159.5 155 49.7
Sopen03g011260 Solanum pennellii HOM05D003150 ORTHO05D003532 3.0e-36 157.1 370 33.5
PGSC0003DMG400041544 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.1e-36 156.4 165 46.7
PGSC0003DMG400035450 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.7e-36 155.6 142 54.9
PGSC0003DMG400039721 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-35 155.2 110 68.2
PGSC0003DMG400043456 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.3e-35 153.7 142 55.6
PGSC0003DMG400035217 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-34 151.8 142 55.6
PGSC0003DMG400036448 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.8e-34 149.8 199 42.7
PGSC0003DMG400042701 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.1e-33 146.7 166 45.2
PGSC0003DMG400038159 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.6e-32 144.1 194 40.7
Sopen01g022170 Solanum pennellii HOM05D003150 ORTHO05D003532 4.5e-32 143.3 108 66.7
PGSC0003DMG400035744 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.8e-32 142.9 174 50.6
Sopen02g003510 Solanum pennellii HOM05D003150 ORTHO05D003532 1.3e-31 141.7 149 53.7
PGSC0003DMG400037949 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-31 140.2 175 46.3
PGSC0003DMG400039669 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-31 140.2 122 56.6
PGSC0003DMG400045228 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-31 140.2 142 53.5
PGSC0003DMG400042063 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-31 139.8 198 41.9
PGSC0003DMG400038808 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-30 137.9 116 56.0
Sopen12g017660 Solanum pennellii HOM05D003150 ORTHO05D003532 2.7e-29 134.0 143 53.1
PGSC0003DMG400043480 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.6e-29 133.3 122 54.9
Sopen09g018910 Solanum pennellii HOM05D003150 ORTHO05D003532 6.1e-29 132.9 155 46.5
PGSC0003DMG400017909 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-28 131.7 135 51.1
Sopen12g024820 Solanum pennellii HOM05D003150 ORTHO05D003532 1.8e-28 131.3 108 62.0
PGSC0003DMG400035013 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-28 130.6 190 37.9
PGSC0003DMG400045170 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-28 130.6 175 42.9
Sopen06g012880 Solanum pennellii HOM05D003150 ORTHO05D003532 4.3e-27 126.7 116 56.0
PGSC0003DMG400044687 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.7e-27 126.3 108 56.5
Sopen07g018920 Solanum pennellii HOM05D003150 ORTHO05D023161 9.7e-27 125.6 163 44.8
Sopen03g012690 Solanum pennellii HOM05D003150 ORTHO05D003532 1.3e-26 125.2 111 55.9
Sopen07g020680 Solanum pennellii HOM05D003150 ORTHO05D003532 6.3e-26 122.9 114 50.9
Sopen12g018100 Solanum pennellii HOM05D003150 ORTHO05D003532 6.3e-26 122.9 103 60.2
PGSC0003DMG400041070 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.8e-25 121.3 108 56.5
Sopen12g010270 Solanum pennellii HOM05D003150 ORTHO05D003532 9.0e-25 119.0 272 34.6
Sopen01g028160 Solanum pennellii HOM05D000014 ORTHO05D000016 2.6e-24 117.5 95 60.0
Sopen09g020650 Solanum pennellii HOM05D003150 ORTHO05D003532 4.5e-24 116.7 108 56.5
PGSC0003DMG400045493 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.5e-24 116.7 191 37.7
Sopen02g008000 Solanum pennellii HOM05D000014 ORTHO05D000016 5.9e-24 116.3 124 52.4
Sopen03g012720 Solanum pennellii HOM05D000014 ORTHO05D003532 2.2e-23 114.4 110 55.5
PGSC0003DMG400046967 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.2e-23 114.4 108 51.9
Sopen01g022880 Solanum pennellii HOM05D003150 ORTHO05D003532 1.1e-22 112.1 108 53.7
Sopen07g020640 Solanum pennellii HOM05D003150 ORTHO05D003532 4.2e-22 110.2 102 52.9
Sopen03g009020 Solanum pennellii HOM05D003150 ORTHO05D003532 5.5e-22 109.8 90 63.3
PGSC0003DMG400038112 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-21 108.6 294 27.6
PGSC0003DMG400047115 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-21 108.6 129 43.4
Sopen10g026280 Solanum pennellii HOM05D003150 ORTHO05D003532 1.6e-21 108.2 137 39.4
PGSC0003DMG400034525 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.1e-21 107.8 108 49.1
Sopen01g028170 Solanum pennellii HOM05D000014 ORTHO05D000093 4.6e-21 106.7 108 51.9
Sopen10g025980 Solanum pennellii HOM05D003150 ORTHO05D003532 1.4e-20 105.1 81 66.7
Sopen09g025070 Solanum pennellii HOM05D000014 ORTHO05D000016 1.8e-20 104.8 218 32.1
PGSC0003DMG400045704 Solanum tuberosum HOM05D016896 ORTHO05D018135 1.8e-20 104.8 113 48.7
PGSC0003DMG400042387 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-20 104.0 107 46.7
PGSC0003DMG400047088 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.7e-20 102.8 87 55.2
PGSC0003DMG400047317 Solanum tuberosum HOM05D016896 ORTHO05D018135 1.1e-19 102.1 67 68.7
PGSC0003DMG400041578 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.3e-19 100.5 199 33.7
PGSC0003DMG400047234 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.7e-19 99.0 160 35.0
PGSC0003DMG400038665 Solanum tuberosum HOM05D016896 ORTHO05D018135 1.3e-18 98.6 80 58.8
Sopen07g019450 Solanum pennellii HOM05D000014 ORTHO05D000016 2.8e-18 97.4 133 42.9
Sopen04g018640 Solanum pennellii HOM05D000014 ORTHO05D000093 3.7e-18 97.1 74 66.2
Sopen08g011960 Solanum pennellii HOM05D000014 ORTHO05D000016 8.2e-18 95.9 102 51.0
Sopen04g019340 Solanum pennellii HOM05D000014 ORTHO05D000093 1.4e-17 95.1 83 59.0
PGSC0003DMG400046215 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-17 95.1 166 32.5
Sopen03g011320 Solanum pennellii HOM05D000014 ORTHO05D000093 3.1e-17 94.0 95 52.6
Sopen10g013450 Solanum pennellii HOM05D000014 ORTHO05D037756 4.1e-17 93.6 95 51.6
PGSC0003DMG400040574 Solanum tuberosum HOM05D016896 ORTHO05D018135 4.1e-17 93.6 74 62.2
Sopen08g012090 Solanum pennellii HOM05D000014 ORTHO05D000093 6.9e-17 92.8 61 77.0
PGSC0003DMG400037930 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.9e-17 92.8 108 42.6
PGSC0003DMG400044792 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.1e-17 92.4 154 39.6
Sopen11g018380 Solanum pennellii HOM05D003150 ORTHO05D003532 2.6e-16 90.9 89 49.4
PGSC0003DMG400035314 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.6e-16 90.9 76 55.3
PGSC0003DMG400037716 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.5e-16 90.1 166 31.9
PGSC0003DMG400038274 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-15 89.0 166 32.5
PGSC0003DMG400039666 Solanum tuberosum HOM05D016896 ORTHO05D018135 1.7e-15 88.2 107 48.6
PGSC0003DMG400047132 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.7e-15 88.2 166 30.7
PGSC0003DMG400041191 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.2e-15 87.8 166 30.7
PGSC0003DMG400038519 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-15 87.0 89 46.1
Sopen11g015970 Solanum pennellii HOM05D000014 ORTHO05D003532 8.5e-15 85.9 106 45.3
PGSC0003DMG400044575 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-14 85.5 91 51.6
PGSC0003DMG400036062 Solanum tuberosum HOM05D000014 ORTHO05D023161 1.4e-14 85.1 93 48.4
PGSC0003DMG400040140 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-14 84.7 59 67.8
PGSC0003DMG400037108 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.2e-14 84.0 147 32.0
Sopen03g017510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-14 83.6 93 47.3
PGSC0003DMG400044395 Solanum tuberosum HOM05D003150 ORTHO05D023161 4.2e-14 83.6 200 35.0
PGSC0003DMG400041453 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.2e-14 82.8 160 30.0
PGSC0003DMG400042865 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-13 82.0 164 29.9
PGSC0003DMG400043679 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-13 82.0 404 23.8
PGSC0003DMG400034976 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-13 81.6 111 34.2
Sopen05g011070 Solanum pennellii HOM05D003150 ORTHO05D023161 2.1e-13 81.3 210 31.4
Sopen07g008370 Solanum pennellii HOM05D000014 ORTHO05D000093 2.1e-13 81.3 136 42.6
PGSC0003DMG400037847 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.1e-13 81.3 160 30.0
PGSC0003DMG400046594 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.7e-13 80.9 166 33.1
PGSC0003DMG400045563 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.6e-13 80.5 163 30.7
PGSC0003DMG400042805 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.7e-13 80.1 166 29.5
Sopen03g015590 Solanum pennellii HOM05D000014 ORTHO05D000016 6.1e-13 79.7 186 34.9
CANSAT01G2673 Cannabis sativa HOM05D000014 ORTHO05D000016 1.0e-12 79.0 126 37.3
Sopen03g013270 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-12 78.6 115 41.7
PGSC0003DMG400039507 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.7e-12 76.3 151 30.5
PGSC0003DMG400046231 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.8e-12 75.9 151 32.5
Sopen08g009940 Solanum pennellii HOM05D000014 ORTHO05D018135 1.1e-11 75.5 80 48.8
Sopen07g014940 Solanum pennellii HOM05D003150 ORTHO05D003532 1.5e-11 75.1 74 48.6
Sopen07g020560 Solanum pennellii HOM05D003150 ORTHO05D003532 1.5e-11 75.1 66 57.6
PGSC0003DMG400034785 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.5e-11 75.1 142 30.3
Sopen08g009900 Solanum pennellii HOM05D000014 ORTHO05D018135 2.6e-11 74.3 79 49.4
Sopen11g019570 Solanum pennellii HOM05D000014 ORTHO05D003532 5.7e-11 73.2 75 53.3
PGSC0003DMG400039562 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.4e-11 72.8 164 29.3
PGSC0003DMG400039259 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-10 72.0 166 29.5
PGSC0003DMG400037998 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.8e-10 70.9 122 33.6
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-10 70.5 168 29.8
PGSC0003DMG400023047 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.3e-10 69.7 154 27.9
PGSC0003DMG400035349 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.2e-10 69.3 113 32.7
PGSC0003DMG400044413 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.4e-09 67.8 109 33.9
PGSC0003DMG400035821 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.3e-09 66.6 116 37.1
Sopen01g012950 Solanum pennellii HOM05D003150 ORTHO05D003532 7.0e-09 66.2 50 60.0
CANSAT78G1382 Cannabis sativa HOM05D000014 ORTHO05D000016 2.6e-08 64.3 164 28.0
CANSAT80G1806 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-08 63.5 168 28.0
Sopen08g005900 Solanum pennellii HOM05D003150 ORTHO05D003532 4.5e-08 63.5 108 31.5
Sopen12g018160 Solanum pennellii HOM05D000014 ORTHO05D003532 5.9e-08 63.2 56 53.6
PGSC0003DMG400041598 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.9e-08 63.2 151 28.5
PGSC0003DMG400039545 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-07 62.0 118 31.4
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 3.8e-07 60.5 163 27.0
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 3.8e-07 60.5 164 27.4
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 3.8e-07 60.5 164 26.8
CANSAT78G1031 Cannabis sativa HOM05D000014 ORTHO05D000016 3.8e-07 60.5 164 27.4
PGSC0003DMG400038652 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-07 60.5 52 53.8
CANSAT80G0547 Cannabis sativa HOM05D000014 ORTHO05D000016 5.0e-07 60.1 164 26.8
PGSC0003DMG400039460 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-07 60.1 86 36.0
PGSC0003DMG400044226 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-07 60.1 293 23.9
PGSC0003DMG400044449 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-07 60.1 68 45.6
CANSAT01G2079 Cannabis sativa HOM05D000014 ORTHO05D000016 6.5e-07 59.7 164 27.4
PGSC0003DMG400038987 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-07 59.7 89 33.7
CANSAT11G1889 Cannabis sativa HOM05D000014 ORTHO05D000016 8.5e-07 59.3 164 26.8
CANSAT21G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 8.5e-07 59.3 119 31.1
Sopen06g004850 Solanum pennellii HOM05D000014 ORTHO05D000016 8.5e-07 59.3 58 58.6
PGSC0003DMG400026773 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.5e-07 59.3 151 29.8
PGSC0003DMG400045008 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-06 58.9 74 40.5
CANSAT25G2739 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-06 57.8 169 26.0
Sopen07g013120 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-06 57.8 208 25.0
CAN.G253.1 Capsicum annuum HOM05D003150 ORTHO05D003532 3.2e-06 57.4 98 34.7
PGSC0003DMG400038164 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.2e-06 57.4 89 33.7
Oeu059205.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-06 57.0 105 32.4
PGSC0003DMG400035348 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.2e-06 57.0 101 31.7
PGSC0003DMG400044155 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.2e-06 57.0 90 34.4
PGSC0003DMG400044590 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.2e-06 57.0 91 35.2
PGSC0003DMG400043631 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.5e-06 56.6 44 59.1
PGSC0003DMG400045642 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.5e-06 56.6 109 30.3
CANSAT25G2186 Cannabis sativa HOM05D000014 ORTHO05D000016 7.2e-06 56.2 163 27.6
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 7.2e-06 56.2 99 32.3
PGSC0003DMG400043837 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.2e-06 56.2 89 32.6


User provided reference genes

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