Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g011010 Solanum pennellii HOM05D011121 ORTHO05D018873 6.4e-186 654.1 360 100.0
Sopen07g022910 Solanum pennellii HOM05D011121 ORTHO05D018873 1.4e-34 151.4 184 54.9
CAN.G2055.2 Capsicum annuum HOM05D011121 ORTHO05D018873 3.3e-33 146.7 123 59.3
CAN.G624.9 Capsicum annuum HOM05D011121 ORTHO05D018873 3.2e-28 130.2 228 37.3
Solyc10g049340.1 Solanum lycopersicum HOM05D011121 ORTHO05D018079 1.1e-25 121.7 193 40.9
Sopen03g013150 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-25 119.0 242 37.6
Sopen10g019830 Solanum pennellii HOM05D000002 ORTHO05D018079 2.9e-21 107.1 208 37.5
TWI75G1210 Tripterygium wilfordii HOM05D011121 ORTHO05D018873 2.6e-17 94.0 210 36.7
TWI23G0778 Tripterygium wilfordii HOM05D011121 ORTHO05D018873 9.7e-17 92.0 80 53.8
Solyc05g024330.1 Solanum lycopersicum HOM05D011121 ORTHO05D018079 8.5e-13 79.0 166 40.4
Solyc03g033760.3 Solanum lycopersicum HOM05D011121 ORTHO05D018873 2.1e-11 74.3 85 47.1
Solyc11g020340.1 Solanum lycopersicum HOM05D011121 ORTHO05D000001 2.1e-11 74.3 77 66.2
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.0e-09 67.8 94 37.2
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-08 64.3 67 40.3
Sopen03g013960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-08 64.3 57 57.9
CsaV3_2G035330 Cucumis sativus L. HOM05D036200 ORTHO05D034667 8.3e-08 62.4 56 46.4
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-07 61.2 70 37.1
RcHm_v2.0_Chr6g0304931 Rosa chinensis HOM05D000002 ORTHO05D000001 7.0e-07 59.3 77 42.9
QL04p024973 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-06 58.5 70 34.3
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-06 57.0 88 37.5


User provided reference genes

Program Settings