Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g010870 Solanum pennellii HOM05D000176 ORTHO05D000106 9.5e-86 320.1 156 100.0
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.6e-70 266.9 195 73.3
Solyc05g044513.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.0e-55 218.8 168 69.0
Sopen04g021620 Solanum pennellii HOM05D000176 ORTHO05D000106 4.6e-48 194.9 170 64.1
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.1e-45 186.0 180 59.4
Solyc02g065112.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.8e-45 185.7 96 95.8
Sopen09g016220 Solanum pennellii HOM05D000176 ORTHO05D000106 1.4e-41 173.3 198 54.5
PGSC0003DMG400021588 Solanum tuberosum HOM05D000176 ORTHO05D000106 7.9e-40 167.5 153 63.4
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.3e-39 166.8 180 55.6
Solyc07g150135.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.0e-34 150.6 130 63.8
Sopen12g020220 Solanum pennellii HOM05D000002 ORTHO05D000047 2.2e-34 149.4 134 62.7
Sopen08g006090 Solanum pennellii HOM05D000176 ORTHO05D000106 8.5e-34 147.5 214 43.5
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 4.2e-33 145.2 216 42.6
Solyc07g019577.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.7e-31 137.9 214 40.7
Sopen07g014370 Solanum pennellii HOM05D000176 ORTHO05D000106 2.6e-27 125.9 149 49.0
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 7.7e-27 124.4 200 40.5
PGSC0003DMG400027876 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.8e-26 122.1 201 39.8
Solyc12g056671.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.5e-26 120.9 200 39.5
PGSC0003DMG400019874 Solanum tuberosum HOM05D000176 ORTHO05D014553 1.4e-25 120.2 207 39.1
Solyc04g050685.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-24 117.1 60 91.7
Sopen06g015770 Solanum pennellii HOM05D000176 ORTHO05D000106 3.0e-23 112.5 60 88.3
Solyc05g150125.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.9e-23 112.1 60 88.3
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.0e-22 109.8 60 86.7
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 2.2e-21 106.3 234 33.8
Solyc08g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.7e-21 105.5 242 33.9
Solyc05g026520.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.4e-20 103.6 234 33.3
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.1e-20 102.1 234 32.9
Solyc07g019498.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 4.1e-20 102.1 234 32.9
Solyc03g059425.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.3e-20 101.7 60 83.3
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.0e-20 101.3 234 34.2
Solyc07g042335.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.7e-19 97.8 149 40.9
Sopen06g015550 Solanum pennellii HOM05D000176 ORTHO05D014553 1.3e-18 97.1 97 54.6
Solyc06g050375.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 2.2e-18 96.3 98 54.1
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 8.5e-18 94.4 220 33.2
Solyc02g065114.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.4e-17 93.6 50 88.0
Solyc02g030462.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.2e-17 91.3 220 32.3
CAN.G802.4 Capsicum annuum HOM05D000176 ORTHO05D000106 6.7e-15 84.7 52 75.0
Sopen05g012360 Solanum pennellii HOM05D000176 ORTHO05D000106 6.7e-15 84.7 143 40.6
Sopen01g015170 Solanum pennellii HOM05D000176 ORTHO05D000106 1.1e-14 84.0 221 30.8
Solyc11g150105.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.6e-14 82.8 60 63.3
PGSC0003DMG400034839 Solanum tuberosum HOM05D000176 ORTHO05D000106 9.7e-14 80.9 59 61.0
Solyc10g018420.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.3e-13 80.5 60 61.7
Solyc12g042603.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.3e-13 80.5 60 61.7
Solyc08g014245.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.8e-13 79.3 60 60.0
CAN.G1611.3 Capsicum annuum HOM05D000176 ORTHO05D014553 8.2e-13 77.8 108 44.4
Solyc01g033995.1 Solanum lycopersicum HOM05D000638 ORTHO05D000801 2.4e-12 76.3 60 60.0
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 9.1e-12 74.3 59 57.6
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 2.6e-11 72.8 59 57.6
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 2.6e-11 72.8 59 57.6
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 2.6e-11 72.8 59 57.6
PGSC0003DMG400000655 Solanum tuberosum HOM05D000176 ORTHO05D000106 7.7e-11 71.2 50 64.0
CAN.G650.30 Capsicum annuum HOM05D000176 ORTHO05D014553 1.3e-10 70.5 107 44.9
PGSC0003DMG400006264 Solanum tuberosum HOM05D000176 ORTHO05D000106 5.0e-10 68.6 39 82.1
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 6.5e-10 68.2 107 41.1
PGSC0003DMG400041083 Solanum tuberosum HOM05D000176 ORTHO05D014553 7.2e-09 64.7 95 43.2
Solyc10g049667.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-08 63.9 107 40.2
CAN.G1102.4 Capsicum annuum HOM05D000176 ORTHO05D014553 4.7e-08 62.0 94 37.2
Solyc11g150107.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.0e-07 60.8 38 73.7
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 2.6e-06 56.2 82 42.7
CAN.G1612.3 Capsicum annuum HOM05D000176 ORTHO05D000106 4.4e-06 55.5 45 53.3
Solyc12g044695.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.4e-06 55.5 42 61.9


User provided reference genes

Program Settings