Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 3.2e-184 649.0 551 100.0
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.1e-181 640.6 551 99.3
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 8.6e-89 332.0 260 71.5
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 2.0e-85 320.9 617 51.1
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 7.8e-82 308.9 551 63.7
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 4.0e-38 163.7 270 43.7
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.2e-37 162.2 257 42.8
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 2.6e-37 161.0 265 43.0
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 1.3e-31 142.1 265 41.5
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 4.8e-31 140.2 257 41.2
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 8.1e-31 139.4 266 41.0
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 2.4e-30 137.9 267 37.1
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 2.4e-30 137.9 260 40.0
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 9.0e-30 136.0 272 38.6
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.2e-29 135.6 262 38.2
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 1.2e-29 135.6 266 40.2
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.5e-29 135.2 270 36.7
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 2.0e-29 134.8 272 38.6
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 2.6e-29 134.4 270 35.9
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 3.4e-29 134.0 250 39.6
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 9.9e-29 132.5 277 38.6
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 2.2e-28 131.3 270 38.5
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 3.8e-28 130.6 267 37.1
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 3.8e-28 130.6 261 38.3
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 4.9e-28 130.2 257 40.9
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 2.4e-27 127.9 261 38.3
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 4.2e-27 127.1 286 38.5
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 5.5e-27 126.7 283 38.2
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 5.5e-27 126.7 270 37.0
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.1e-27 126.3 265 37.7
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 9.3e-27 125.9 266 39.8
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.2e-26 125.6 262 38.5
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.1e-26 124.8 268 38.8
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 2.7e-26 124.4 288 37.5
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 2.7e-26 124.4 266 39.5
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.7e-26 124.4 266 39.5
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 3.5e-26 124.0 272 36.8
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 6.0e-26 123.2 245 38.0
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 1.8e-25 121.7 269 38.3
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 5.1e-25 120.2 271 35.8
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 8.7e-25 119.4 326 35.3
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 2.5e-24 117.9 259 37.8
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 2.5e-24 117.9 271 37.6
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.3e-23 115.5 219 40.6
Nitab4.5_0000048g0190 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.3e-23 115.5 105 68.6
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 2.1e-23 114.8 266 35.7
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 2.8e-23 114.4 263 38.0
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 3.7e-23 114.0 242 36.4
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 4.8e-23 113.6 212 40.6
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 8.2e-23 112.8 272 35.7
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.8e-22 111.7 256 38.3
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 4.0e-22 110.5 269 36.8
PGSC0003DMG400004043 Solanum tuberosum HOM05D006830 ORTHO05D008119 4.0e-22 110.5 70 85.7
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.0e-22 110.5 260 37.7
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 6.9e-22 109.8 272 35.7
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 3.4e-21 107.5 242 35.5
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 7.6e-21 106.3 213 39.9
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.0e-20 105.9 243 35.8
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 1.7e-20 105.1 212 39.6
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 2.2e-20 104.8 275 34.2
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 4.9e-20 103.6 265 34.3
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 6.5e-20 103.2 237 38.0
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 6.5e-20 103.2 235 36.2
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 8.4e-20 102.8 255 35.7
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 3.2e-19 100.9 203 38.9
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 1.6e-18 98.6 263 33.5
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 2.1e-18 98.2 210 39.0
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 2.7e-18 97.8 280 32.5
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 3.5e-18 97.4 262 31.3
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 3.5e-18 97.4 265 33.6
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 6.0e-18 96.7 264 33.0
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.8e-17 95.1 228 35.5
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 3.0e-17 94.4 237 34.6
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 5.1e-17 93.6 263 33.1
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 6.7e-17 93.2 265 32.5
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.1e-16 92.4 201 39.3
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 9.7e-16 89.4 262 34.4
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.6e-15 88.6 265 31.7
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 8.2e-15 86.3 189 38.6
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 2.4e-14 84.7 258 34.1
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 4.1e-14 84.0 198 33.8
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 5.3e-14 83.6 207 35.3
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 6.9e-14 83.2 290 31.4
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 6.9e-14 83.2 99 50.5
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 5.9e-13 80.1 197 36.5
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 6.5e-12 76.6 264 29.5
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 6.5e-12 76.6 270 29.6
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 8.5e-12 76.3 264 29.5
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 8.5e-12 76.3 264 29.2
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 8.5e-12 76.3 264 29.2
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 5.5e-11 73.6 68 63.2
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 9.4e-11 72.8 209 30.1
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 2.7e-10 71.2 199 32.2
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 4.6e-10 70.5 199 31.7
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 2.3e-09 68.2 140 38.6
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.5e-08 65.5 70 58.6
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 3.3e-08 64.3 197 31.0
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 5.7e-08 63.5 257 27.6
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.3e-07 62.4 203 32.0
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 1.7e-07 62.0 62 56.5
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 2.2e-07 61.6 124 37.9
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.1e-06 59.3 208 29.8
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 4.1e-06 57.4 62 51.6
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 5.3e-06 57.0 254 29.9
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 6.9e-06 56.6 92 40.2


User provided reference genes

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