Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2538.8 1269 100.0
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2530.4 1269 99.6
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2506.1 1269 98.7
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2444.5 1272 95.9
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2412.5 1268 94.8
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2268.8 1269 90.0
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2231.1 1268 85.6
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2225.7 1270 85.4
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2225.3 1269 85.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2221.4 1269 85.4
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2219.9 1269 85.3
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2218.4 1267 85.2
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2216.8 1270 85.2
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2215.3 1269 85.2
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2214.9 1270 85.2
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2214.5 1267 85.5
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2213.3 1269 84.9
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2207.2 1264 84.8
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2206.0 1267 84.8
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2205.6 1270 84.6
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2205.3 1269 84.8
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2204.5 1268 84.5
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2202.9 1268 84.4
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2198.3 1268 84.1
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2194.1 1267 84.0
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2193.7 1267 84.1
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2191.8 1268 84.0
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2189.5 1267 83.7
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2189.1 1267 84.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2186.8 1268 84.1
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1267 84.1
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1263 84.3
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1267 84.0
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2179.1 1266 83.6
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2179.1 1267 84.4
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2178.3 1267 83.4
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2177.5 1267 84.3
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2172.9 1267 84.1
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2172.9 1267 82.9
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2172.1 1267 84.0
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2171.4 1267 83.5
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1267 82.6
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1267 82.6
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1267 83.4
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2170.2 1267 82.9
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1267 82.6
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2168.7 1267 83.7
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2168.7 1267 82.6
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2167.9 1267 82.6
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2164.4 1239 85.1
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2164.4 1267 82.6
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2164.0 1267 83.9
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1267 82.6
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2159.8 1268 82.8
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1271 83.0
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1267 82.3
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1267 83.7
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1267 83.6
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2155.6 1268 82.9
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2155.2 1273 83.1
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2155.2 1267 82.4
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2154.8 1273 83.1
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1266 83.2
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2149.8 1262 83.8
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2149.4 1266 82.9
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2146.7 1273 82.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1268 83.2
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2144.4 1267 82.0
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2144.0 1269 82.4
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1268 82.3
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2137.8 1270 81.9
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1268 82.3
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1267 82.5
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2132.8 1263 82.0
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1267 83.0
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2130.1 1269 82.3
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1268 82.1
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2127.8 1270 81.7
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2125.9 1266 81.5
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2124.0 1208 85.9
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1249 82.6
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2116.7 1268 81.5
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2116.3 1269 80.7
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2108.6 1249 82.4
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2108.2 1270 81.0
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2088.2 1268 80.8
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2075.8 1274 80.4
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2071.6 1267 80.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2068.5 1268 80.4
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2056.6 1264 80.3
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2056.2 1270 78.6
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2048.1 1267 78.6
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2016.9 1266 78.2
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1985.7 1268 80.8
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1969.9 1266 76.5
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1961.4 1166 82.9
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1929.1 1268 73.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1887.5 1271 73.9
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1886.7 1271 73.1
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1865.1 1250 74.0
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1848.2 1069 83.1
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1843.2 1191 76.9
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1835.8 1274 70.8
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1804.3 1089 81.1
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1803.1 1270 72.0
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1795.4 1130 79.4
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1625.1 963 81.1
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1565.8 1047 73.6
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1547.3 1322 60.8
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1413.3 813 83.9
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1359.7 1268 58.8
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1338.2 1340 54.0
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1313.9 1393 52.3
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1259.2 725 84.3
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1161.0 1023 61.9
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1140.6 811 72.0
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 9.3e-264 914.4 572 79.4
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.8e-260 902.1 1254 41.4
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 9.3e-256 887.9 502 86.7
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-220 770.8 687 57.6
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 1.3e-217 761.1 528 72.9
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.3e-201 708.0 455 78.9
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-181 641.7 389 82.0
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 5.8e-133 479.9 359 67.7
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 5.3e-118 430.3 312 71.8
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 2.2e-108 398.3 270 75.2
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 1.2e-82 312.8 480 42.5
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.2e-72 279.6 170 80.0
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.7e-71 274.6 170 79.4
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.4e-70 272.7 170 78.8
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.2e-62 245.0 138 87.0
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 9.5e-59 233.4 234 53.8
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 4.4e-48 198.0 116 76.7
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 4.0e-41 174.9 155 63.9
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.4e-39 167.2 91 86.8
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.0e-36 160.2 183 50.8
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 7.6e-32 144.1 99 63.6
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.8e-25 122.9 104 59.6


User provided reference genes

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