Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.1e-104 383.3 191 100.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 4.4e-101 371.3 191 96.9
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.4e-94 349.7 194 91.2
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 8.9e-78 293.9 196 78.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 6.4e-60 234.6 195 68.2
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.1e-54 217.2 193 57.5
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.0e-54 215.3 179 62.0
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.0e-54 215.3 179 62.0
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.0e-53 213.0 194 59.3
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 7.6e-53 211.1 197 60.4
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.0e-52 210.7 175 62.9
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.7e-52 209.9 198 58.1
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 2.2e-52 209.5 198 60.1
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 2.2e-52 209.5 196 57.7
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.8e-52 208.8 199 58.3
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 4.9e-52 208.4 195 59.5
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.1e-51 207.2 197 57.9
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.9e-51 206.5 186 64.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 5.5e-51 204.9 199 57.3
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.2e-50 203.8 200 55.5
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.2e-50 203.8 199 59.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 6.0e-50 201.4 189 57.1
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 7.9e-50 201.1 166 64.5
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 7.9e-50 201.1 170 64.1
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.0e-49 200.7 184 60.3
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.0e-49 200.7 170 64.1
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.0e-49 200.7 156 67.3
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.3e-49 200.3 197 57.4
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 2.3e-49 199.5 139 72.7
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.0e-49 199.1 170 63.5
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.9e-49 198.7 172 62.8
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 5.1e-49 198.4 174 62.1
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.1e-48 197.2 175 60.6
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.5e-48 196.8 184 62.0
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.5e-48 196.8 138 71.0
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.9e-48 196.4 164 64.6
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 5.7e-48 194.9 176 59.1
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.3e-47 193.7 177 58.8
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.3e-47 193.7 178 59.6
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.6e-47 193.4 167 59.3
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 6.3e-47 191.4 171 62.0
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 8.2e-47 191.0 153 67.3
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.4e-46 190.3 149 65.8
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.4e-46 190.3 160 66.2
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.4e-46 190.3 132 72.7
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 5.3e-46 188.3 166 61.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.2e-45 187.2 154 63.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.5e-45 186.8 201 54.2
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.6e-45 186.0 145 63.4
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 1.0e-44 184.1 200 51.0
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 5.0e-44 181.8 122 72.1
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.1e-43 180.6 178 58.4
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.4e-43 180.3 158 61.4
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.4e-43 180.3 184 56.5
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.5e-43 179.5 178 57.9
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 5.5e-43 178.3 122 70.5
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 7.2e-43 177.9 139 66.9
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.6e-42 176.8 124 68.5
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.1e-42 176.4 187 53.5
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 2.7e-42 176.0 114 76.3
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 2.7e-42 176.0 159 59.1
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 4.6e-42 175.3 139 66.2
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 4.6e-42 175.3 124 66.9
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.3e-41 173.7 114 74.6
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.3e-41 172.9 187 52.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 3.0e-41 172.6 137 67.2
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 6.7e-41 171.4 125 69.6
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 6.7e-41 171.4 155 59.4
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.1e-40 170.6 123 69.1
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.1e-40 170.6 123 69.1
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.5e-40 170.2 162 57.4
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 4.3e-40 168.7 125 68.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 4.3e-40 168.7 125 68.0
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 5.7e-40 168.3 148 60.1
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 7.4e-40 167.9 125 68.0
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.2e-39 166.4 147 59.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 2.8e-39 166.0 123 68.3
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 6.3e-39 164.9 139 63.3
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.1e-38 164.1 122 67.2
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.8e-38 163.3 128 63.3
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 2.4e-38 162.9 124 70.2
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 6.9e-38 161.4 123 66.7
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.7e-36 156.8 123 66.7
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.7e-36 156.8 158 55.1
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.2e-35 152.5 157 54.8
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 5.5e-35 151.8 186 51.6
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 5.5e-35 151.8 186 51.6
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 9.4e-35 151.0 194 46.9
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.7e-34 149.4 136 60.3
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 6.1e-34 148.3 126 62.7
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 8.8e-33 144.4 139 59.7
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 3.1e-30 136.0 148 52.7
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 7.7e-29 131.3 137 49.6
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 6.1e-26 121.7 114 55.3
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.8e-25 120.2 135 46.7
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 6.7e-25 118.2 123 47.2
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 9.7e-24 114.4 347 29.4
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.6e-21 107.1 89 59.6
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.6e-21 107.1 82 61.0
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.5e-21 105.5 89 58.4
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 4.5e-21 105.5 82 61.0
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 3.3e-16 89.4 80 52.5
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 2.5e-11 73.2 49 69.4
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 1.4e-09 67.4 87 47.1
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.8e-09 67.0 52 63.5


User provided reference genes

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