Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 4.6e-137 491.5 301 100.0
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 5.2e-88 328.6 289 64.7
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-85 320.9 291 67.0
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.4e-85 319.7 294 61.9
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.4e-69 267.3 287 57.1
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 7.8e-68 261.5 292 65.4
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.4e-61 240.7 291 50.2
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 4.0e-56 222.6 291 45.7
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.6e-52 209.1 290 41.0
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 8.1e-49 198.4 261 42.5
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 1.3e-46 191.0 118 74.6
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 6.4e-46 188.7 118 73.7
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.3e-43 181.0 291 35.4
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 3.3e-42 176.4 112 69.6
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 2.1e-41 173.7 294 36.4
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.1e-41 173.7 279 54.8
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 8.1e-41 171.8 112 67.0
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.6e-39 165.2 342 47.4
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.3e-38 164.5 240 40.4
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 2.4e-37 160.2 294 35.7
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.6e-36 157.5 265 35.8
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 2.3e-35 153.7 291 32.3
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.7e-27 127.5 246 31.7
Nitab4.5_0011155g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.8e-25 120.2 225 32.9
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.2e-22 110.5 110 52.7
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.9e-22 110.2 267 29.2
PGSC0003DMG400046725 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.9e-21 107.5 89 58.4
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 2.7e-20 103.6 102 46.1
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 2.7e-20 103.6 102 46.1
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 5.1e-19 99.4 106 46.2
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 6.7e-19 99.0 118 42.4
Sopen09g003390 Solanum pennellii HOM05D007354 ORTHO05D006294 4.3e-18 96.3 87 51.7
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 4.3e-18 96.3 106 43.4
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 9.6e-18 95.1 95 45.3
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 9.6e-18 95.1 98 50.0
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.6e-17 94.4 104 42.3
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.7e-17 93.2 107 43.0
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 6.2e-17 92.4 101 43.6
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 1.4e-16 91.3 60 61.7
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.4e-16 91.3 129 35.7
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.8e-16 90.9 95 44.2
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.8e-16 90.9 116 37.1
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.1e-16 90.1 116 37.9
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 4.0e-16 89.7 96 43.8
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.0e-15 87.4 104 39.4
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 2.6e-15 87.0 112 42.0
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 2.6e-15 87.0 104 38.5
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 5.8e-15 85.9 104 38.5
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.8e-15 85.9 129 34.9
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-14 84.3 109 35.8
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-14 84.3 96 41.7
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 8.4e-14 82.0 97 38.1
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-13 81.6 112 35.7
Peaxi162Scf00017g00044 Petunia axillaris HOM05D007354 ORTHO05D006294 2.5e-13 80.5 214 28.5
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 2.5e-13 80.5 99 37.4
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 4.2e-13 79.7 100 41.0
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 5.5e-13 79.3 105 41.0
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.6e-12 77.8 287 23.7
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.7e-12 77.0 105 41.9
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 7.9e-12 75.5 105 41.0
Peaxi162Scf00123g00126 Petunia axillaris HOM05D007354 ORTHO05D006294 1.3e-11 74.7 219 28.3
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 1.8e-11 74.3 98 33.7
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 3.0e-11 73.6 95 35.8
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.0e-11 73.6 110 33.6
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.9e-11 73.2 108 38.9
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 5.1e-11 72.8 106 41.5
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 6.7e-11 72.4 113 37.2
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-10 71.6 103 36.9
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.3e-10 70.1 120 30.8
Nitab4.5_0024035g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.6e-10 69.3 79 43.0
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 9.6e-10 68.6 100 33.0
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 1.3e-09 68.2 95 35.8
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 3.7e-09 66.6 96 37.5
EL10Ac4g07794 Beta vulgaris HOM05D003035 ORTHO05D000440 8.2e-09 65.5 113 32.7
EL10Ac4g07793 Beta vulgaris HOM05D003035 ORTHO05D000440 1.4e-08 64.7 113 32.7
Nitab4.5_0001173g0080 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.4e-08 63.9 59 50.8
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 3.1e-08 63.5 102 32.4
Nitab4.5_0003906g0070 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.0e-07 60.8 251 24.3
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 2.6e-07 60.5 119 36.1
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 2.6e-07 60.5 119 36.1
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 1.0e-06 58.5 108 35.2
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 2.2e-06 57.4 112 28.6
Nitab4.5_0004281g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.9e-06 57.0 86 34.9
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 2.9e-06 57.0 130 33.1
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 3.8e-06 56.6 100 30.0
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 4.9e-06 56.2 39 66.7
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.5e-06 55.8 78 34.6


User provided reference genes

Program Settings