Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 7.0e-81 303.9 154 100.0
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.4e-76 289.7 153 96.1
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.3e-66 256.5 154 86.4
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 5.0e-63 244.6 155 80.0
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 7.2e-62 240.7 153 80.4
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 5.2e-52 208.0 156 76.3
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 1.2e-48 196.8 150 68.0
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 3.9e-47 191.8 152 65.8
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 6.8e-44 181.0 150 64.0
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 1.2e-40 170.2 147 63.9
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.1e-40 169.5 152 59.2
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 2.1e-40 169.5 141 61.7
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 4.6e-40 168.3 152 58.6
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 3.9e-39 165.2 154 60.4
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 5.1e-39 164.9 148 59.5
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 8.6e-39 164.1 145 62.8
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 1.5e-38 163.3 149 59.1
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 1.5e-38 163.3 149 56.4
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 1.9e-38 162.9 151 59.6
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 1.9e-38 162.9 148 56.8
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 3.3e-38 162.2 154 56.5
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 7.3e-38 161.0 147 57.1
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 9.5e-38 160.6 157 56.7
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.2e-37 160.2 147 57.8
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.6e-37 159.8 146 58.9
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.6e-37 159.8 152 59.2
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 3.6e-37 158.7 156 55.8
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 8.1e-37 157.5 151 58.3
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.4e-36 156.8 120 64.2
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.8e-36 156.4 149 57.7
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 1.8e-36 156.4 150 58.0
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 2.3e-36 156.0 151 57.6
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 3.1e-36 155.6 144 56.9
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 4.0e-36 155.2 151 58.3
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.2e-35 153.7 148 59.5
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 4.4e-35 151.8 151 56.3
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 9.9e-35 150.6 147 56.5
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.3e-34 150.2 143 57.3
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 3.7e-34 148.7 151 55.6
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.4e-34 147.5 143 56.6
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 8.4e-34 147.5 143 56.6
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 2.4e-33 146.0 155 54.2
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 4.1e-33 145.2 146 56.2
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 7.1e-33 144.4 146 55.5
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 7.1e-33 144.4 109 65.1
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 1.2e-32 143.7 150 52.7
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 1.6e-32 143.3 151 55.6
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.5e-32 142.1 146 50.7
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 4.6e-32 141.7 146 55.5
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 6.0e-32 141.4 149 53.0
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.8e-32 141.0 146 50.0
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 1.3e-31 140.2 146 56.2
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.3e-31 140.2 146 49.3
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 3.0e-31 139.0 135 54.1
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 8.6e-31 137.5 142 52.1
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 1.1e-30 137.1 150 52.0
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.1e-30 137.1 146 48.6
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.5e-30 136.7 119 62.2
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 4.3e-30 135.2 146 51.4
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 4.3e-30 135.2 146 51.4
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 7.3e-30 134.4 146 50.7
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 9.6e-30 134.0 150 50.7
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.2e-29 133.7 144 51.4
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 2.8e-29 132.5 146 49.3
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 8.1e-29 131.0 145 46.9
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.1e-29 131.0 144 50.7
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 1.1e-28 130.6 142 49.3
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 1.8e-28 129.8 147 50.3
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 3.1e-28 129.0 147 51.7
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 4.0e-28 128.6 102 62.7
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 5.2e-28 128.3 141 47.5
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 6.8e-28 127.9 150 48.0
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 6.8e-28 127.9 147 51.0
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 1.2e-27 127.1 137 52.6
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 2.0e-27 126.3 109 60.6
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.4e-27 125.6 153 47.1
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 5.8e-27 124.8 147 51.0
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 5.8e-27 124.8 145 50.3
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 7.6e-27 124.4 151 47.7
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 7.6e-27 124.4 147 48.3
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 2.9e-26 122.5 115 56.5
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 2.9e-26 122.5 146 50.0
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 4.9e-26 121.7 147 46.9
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.1e-25 120.6 126 52.4
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 1.9e-25 119.8 141 47.5
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 3.2e-25 119.0 136 49.3
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 4.2e-25 118.6 145 51.0
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 5.4e-25 118.2 117 51.3
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 9.3e-25 117.5 141 42.6
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 2.1e-24 116.3 147 47.6
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 3.5e-24 115.5 142 48.6
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 1.3e-23 113.6 125 47.2
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 1.3e-23 113.6 128 48.4
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 1.7e-23 113.2 147 48.3
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.7e-23 113.2 106 54.7
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 2.5e-22 109.4 146 45.9
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 4.3e-22 108.6 146 45.9
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 1.6e-21 106.7 151 45.0
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 2.1e-21 106.3 126 49.2
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.1e-21 106.3 144 48.6
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 1.1e-20 104.0 146 43.8
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 3.1e-20 102.4 84 60.7
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 3.1e-20 102.4 151 46.4
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 3.1e-20 102.4 151 46.4
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 9.9e-19 97.4 127 44.1
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 3.8e-18 95.5 138 48.6
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 4.9e-18 95.1 148 41.9
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 4.9e-18 95.1 145 43.4
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 4.2e-17 92.0 137 43.1
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 1.2e-16 90.5 79 60.8
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 6.0e-16 88.2 131 41.2
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 3.0e-15 85.9 78 60.3
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 3.0e-15 85.9 78 60.3
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 3.6e-13 79.0 137 40.9
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 6.9e-12 74.7 63 63.5
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 6.9e-12 74.7 80 51.2
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 3.8e-10 68.9 104 43.3
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 8.4e-10 67.8 104 43.3
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.9e-09 66.6 132 40.2
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 2.4e-09 66.2 104 42.3
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 2.4e-09 66.2 104 42.3
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 3.2e-09 65.9 89 46.1
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 5.5e-09 65.1 70 45.7
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.6e-08 63.5 135 38.5
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 7.9e-08 61.2 108 36.1
Pp3c23_8320 Physcomitrium patens HOM05D053615 ORTHO05D007309 5.1e-07 58.5 70 45.7
Oeu023852.1 Olea europaea HOM05D006043 ORTHO05D007309 6.7e-07 58.2 141 32.6


User provided reference genes

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