Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 1.7e-84 316.2 189 100.0
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.0e-78 295.4 191 87.4
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 5.7e-77 291.2 189 87.8
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.4e-67 259.2 190 78.4
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 1.3e-60 236.9 189 76.2
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 2.4e-59 232.6 187 74.9
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.4e-59 232.6 189 71.4
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 2.1e-58 229.6 187 78.6
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.7e-57 226.5 189 73.5
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 4.7e-55 218.4 189 64.6
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 5.1e-49 198.4 190 63.2
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 3.6e-47 192.2 200 62.0
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.8e-46 189.9 188 63.3
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.4e-45 185.3 188 62.2
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 9.9e-45 184.1 195 57.9
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.2e-44 183.0 177 65.0
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 1.1e-43 180.6 260 50.0
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 1.3e-23 114.0 186 44.1
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 3.8e-20 102.4 183 38.3
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 3.2e-19 99.4 188 38.8
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 6.0e-18 95.1 175 38.9
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 6.7e-17 91.7 186 37.1
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 1.1e-14 84.3 189 34.9
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 5.3e-14 82.0 184 34.8
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 5.3e-14 82.0 178 35.4
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 6.5e-12 75.1 174 34.5
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 1.1e-11 74.3 185 34.6
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.1e-11 74.3 179 28.5
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 3.2e-11 72.8 178 34.8
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 4.2e-11 72.4 192 32.8
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 5.5e-11 72.0 179 29.1
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 9.3e-11 71.2 181 33.7
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 1.2e-10 70.9 179 30.7
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 7.9e-10 68.2 88 44.3
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 7.9e-10 68.2 179 31.3
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 7.9e-10 68.2 179 31.8
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.0e-09 67.8 179 30.7
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 1.3e-09 67.4 182 29.7
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.8e-09 67.0 179 30.2
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 2.3e-09 66.6 187 32.1
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 2.3e-09 66.6 180 31.1
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 3.0e-09 66.2 203 29.6
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 3.9e-09 65.9 200 33.0
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.9e-09 65.9 179 29.6
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 5.1e-09 65.5 179 29.6
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 8.7e-09 64.7 186 29.0
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.1e-08 64.3 176 31.8
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.1e-08 64.3 80 43.8
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 1.5e-08 63.9 169 30.8
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 1.5e-08 63.9 192 30.7
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 1.9e-08 63.5 179 29.6
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 4.3e-08 62.4 187 31.0
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 4.3e-08 62.4 187 31.0
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 4.3e-08 62.4 179 27.9
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 4.3e-08 62.4 80 42.5
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.7e-08 62.0 187 31.6
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.7e-08 62.0 187 31.6
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 7.4e-08 61.6 187 31.6
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 7.4e-08 61.6 182 30.8
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 7.4e-08 61.6 179 30.7
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.2e-07 60.1 180 30.0
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 2.8e-07 59.7 183 31.1
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.8e-07 59.7 179 28.5
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 3.7e-07 59.3 188 29.3
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.4e-06 57.4 81 40.7
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 2.4e-06 56.6 179 26.3
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 2.4e-06 56.6 85 41.2
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 2.4e-06 56.6 179 26.8
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 3.1e-06 56.2 182 30.2
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.1e-06 56.2 179 28.5
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 5.3e-06 55.5 187 28.3
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 6.9e-06 55.1 44 56.8


User provided reference genes

Program Settings