Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 1.3e-81 306.6 182 100.0
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.2e-76 290.0 182 90.7
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.5e-69 266.5 185 83.8
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.0e-62 243.8 181 76.8
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 7.3e-61 237.7 186 73.1
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 8.9e-59 230.7 187 78.6
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 6.6e-54 214.5 180 68.3
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.2e-52 210.3 182 67.6
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 3.6e-52 208.8 180 63.9
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.3e-51 206.1 185 65.4
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 2.0e-50 203.0 184 69.0
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 9.8e-50 200.7 182 68.1
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.4e-48 196.8 183 68.3
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.1e-48 195.3 170 70.0
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 4.6e-47 191.8 190 61.1
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 3.0e-46 189.1 253 52.2
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 4.3e-45 185.3 201 55.7
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 4.0e-27 125.6 179 49.2
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.7e-23 112.8 181 42.0
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 3.3e-21 105.9 186 41.9
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 6.2e-20 101.7 170 41.2
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 6.9e-19 98.2 185 41.1
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 1.0e-14 84.3 176 36.4
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 1.0e-14 84.3 176 36.4
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.3e-14 84.0 184 38.0
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.5e-13 80.5 192 38.5
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 4.3e-13 79.0 177 37.3
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 5.6e-13 78.6 174 31.6
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 7.4e-13 78.2 174 33.9
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 4.8e-12 75.5 174 31.6
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 6.2e-12 75.1 174 33.9
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 6.2e-12 75.1 174 33.9
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 6.2e-12 75.1 196 31.6
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 8.1e-12 74.7 185 33.5
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 8.1e-12 74.7 170 35.3
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 1.1e-11 74.3 174 31.0
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.1e-11 74.3 174 32.8
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.8e-11 73.6 174 32.2
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.1e-11 72.8 174 34.5
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.1e-11 72.8 174 34.5
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 4.0e-11 72.4 177 32.8
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 4.0e-11 72.4 174 31.6
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 6.9e-11 71.6 197 35.5
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 9.0e-11 71.2 175 33.1
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.2e-10 70.9 174 32.2
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.2e-10 70.9 174 33.9
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.5e-10 70.5 174 34.5
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 2.6e-10 69.7 179 38.0
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.6e-10 69.7 175 30.9
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 3.4e-10 69.3 174 31.6
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 4.5e-10 68.9 180 32.2
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 5.8e-10 68.6 175 31.4
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 9.9e-10 67.8 177 33.9
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 9.9e-10 67.8 175 34.3
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.3e-09 67.4 174 32.8
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 1.7e-09 67.0 84 42.9
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.8e-09 65.9 181 33.7
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 6.4e-09 65.1 176 32.4
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 1.1e-08 64.3 169 33.1
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.4e-08 63.9 171 31.6
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.9e-08 63.5 74 45.9
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 2.4e-08 63.2 174 28.2
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 5.5e-08 62.0 174 28.2
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 5.5e-08 62.0 177 30.5
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 1.2e-07 60.8 182 31.9
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.2e-07 60.8 77 44.2
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 1.6e-07 60.5 174 27.6
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.5e-07 59.3 174 31.0
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 4.6e-07 58.9 183 29.0
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 6.0e-07 58.5 180 29.4
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.8e-06 57.0 80 40.0
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.0e-06 56.2 74 40.5
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 3.0e-06 56.2 81 43.2
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 3.0e-06 56.2 185 29.2
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 3.9e-06 55.8 36 63.9
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 8.7e-06 54.7 80 38.8


User provided reference genes

Program Settings