Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 3.5e-103 378.3 184 100.0
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 3.5e-103 378.3 184 100.0
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.6e-98 362.1 184 96.7
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 6.3e-97 357.5 183 95.1
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 6.6e-94 347.4 178 92.7
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.5e-93 346.3 180 92.2
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.5e-93 345.5 180 91.7
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.6e-92 342.8 178 92.1
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 2.1e-92 342.4 179 92.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 2.8e-92 342.0 178 92.1
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 3.6e-92 341.7 179 91.1
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 6.1e-92 340.9 179 90.5
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 6.1e-92 340.9 181 91.2
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.3e-91 339.0 180 90.0
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 4.0e-91 338.2 178 91.6
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 5.2e-91 337.8 180 90.6
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 6.8e-91 337.4 178 90.4
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 8.9e-91 337.0 180 90.0
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.5e-90 336.3 179 88.8
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 2.6e-90 335.5 178 88.8
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 7.5e-90 334.0 180 88.9
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 9.8e-90 333.6 179 89.4
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.7e-89 332.8 195 84.1
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 2.2e-89 332.4 180 88.3
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 2.2e-89 332.4 180 88.3
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 2.9e-89 332.0 180 87.8
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 6.4e-89 330.9 178 89.3
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.4e-88 328.9 180 87.8
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 5.4e-88 327.8 177 89.8
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 7.0e-88 327.4 178 88.2
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 7.0e-88 327.4 178 89.9
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.2e-87 326.6 180 87.2
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.6e-87 326.2 177 87.6
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.0e-87 325.9 179 87.7
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.0e-87 325.9 181 87.3
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 4.6e-87 324.7 182 87.4
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 1.0e-86 323.6 179 86.0
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 1.0e-86 323.6 178 86.5
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.7e-86 322.8 184 84.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.3e-86 322.4 178 86.0
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 3.9e-86 321.6 180 86.1
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.1e-85 320.1 179 86.0
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.5e-85 319.7 179 89.4
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 5.6e-85 317.8 178 84.3
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 7.3e-85 317.4 184 83.7
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.3e-85 317.4 209 78.0
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 9.5e-85 317.0 189 81.5
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.4e-83 313.2 178 84.8
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 4.0e-83 311.6 180 82.8
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 4.0e-83 311.6 180 83.3
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 4.0e-83 311.6 178 84.8
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 6.8e-83 310.8 180 82.2
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 8.9e-83 310.5 178 83.1
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.2e-82 310.1 180 82.2
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.2e-82 310.1 179 83.8
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 1.2e-82 310.1 182 82.4
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.2e-82 310.1 181 82.9
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.2e-82 310.1 179 83.2
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.2e-82 310.1 179 83.8
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.0e-82 309.3 178 83.1
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 7.5e-82 307.4 180 81.1
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 7.5e-82 307.4 178 83.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 9.8e-82 307.0 180 81.7
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 9.8e-82 307.0 180 81.7
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 1.1e-80 303.5 178 83.7
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.9e-80 302.8 178 81.5
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 3.2e-80 302.0 178 80.3
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 4.1e-80 301.6 178 80.9
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 7.1e-80 300.8 167 85.6
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.6e-79 299.7 177 79.7
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 4.6e-79 298.1 179 82.1
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.3e-78 296.6 177 79.7
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.9e-77 292.7 180 79.4
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.8e-76 288.9 153 88.2
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.6e-76 288.5 181 79.6
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 4.0e-75 285.0 178 75.3
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.2e-74 283.5 184 79.3
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 9.9e-74 280.4 178 77.5
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 2.9e-73 278.9 180 77.2
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 3.7e-73 278.5 183 77.6
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 6.4e-73 277.7 178 75.3
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.7e-71 272.3 144 89.6
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 4.6e-71 271.6 178 74.2
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.3e-69 265.4 178 74.7
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.1e-67 260.4 179 69.3
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 4.2e-64 248.4 178 66.9
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 6.0e-63 244.6 172 69.8
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.9e-61 239.6 148 81.1
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 1.1e-59 233.8 121 88.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.5e-58 229.9 123 91.1
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.1e-56 223.8 119 88.2
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.5e-53 213.4 117 83.8
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.2e-47 193.7 145 68.3
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.9e-45 186.4 98 87.8
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 8.1e-44 181.0 179 54.7
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.2e-41 172.9 94 86.2
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-34 150.6 129 63.6
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 7.9e-31 137.9 75 88.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.5e-26 123.6 65 87.7
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.8e-20 102.1 58 86.2
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 3.0e-14 82.8 55 67.3


User provided reference genes

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