Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 4.7e-68 261.2 140 100.0
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 2.3e-67 258.8 140 98.6
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 2.6e-66 255.4 140 97.9
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 3.7e-57 224.9 139 87.1
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.5e-53 212.2 129 88.4
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.1e-52 209.1 129 86.0
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.6e-52 208.4 137 85.4
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 2.4e-40 169.1 130 70.0
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 3.0e-38 162.2 125 69.6
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.1e-36 156.0 128 64.8
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 2.8e-36 155.6 126 65.1
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 1.4e-35 153.3 125 66.4
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 3.1e-35 152.1 125 60.8
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 6.9e-35 151.0 127 63.8
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 2.6e-34 149.1 124 60.5
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 3.4e-34 148.7 128 59.4
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.4e-34 148.7 128 64.1
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 5.8e-34 147.9 123 64.2
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 1.7e-33 146.4 127 60.6
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 3.8e-33 145.2 126 61.9
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 6.4e-33 144.4 136 56.6
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 6.4e-33 144.4 124 59.7
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 8.4e-33 144.1 143 60.1
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.9e-32 142.9 127 60.6
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.4e-32 142.5 133 57.9
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 4.2e-32 141.7 127 59.8
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 4.2e-32 141.7 128 59.4
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 5.4e-32 141.4 124 61.3
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 7.1e-32 141.0 142 55.6
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 7.1e-32 141.0 139 57.6
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 1.6e-31 139.8 126 58.7
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 7.9e-31 137.5 127 58.3
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 1.0e-30 137.1 130 54.6
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 1.3e-30 136.7 114 64.0
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 2.3e-30 136.0 132 59.8
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 2.3e-30 136.0 127 56.7
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 3.0e-30 135.6 140 55.0
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 3.9e-30 135.2 132 59.8
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 8.7e-30 134.0 131 55.0
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.1e-29 133.7 125 56.0
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.1e-29 133.7 127 59.8
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 1.9e-29 132.9 115 61.7
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.5e-29 132.5 129 53.5
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 4.3e-29 131.7 127 53.5
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 4.3e-29 131.7 126 54.0
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 4.3e-29 131.7 144 52.8
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 5.6e-29 131.3 135 54.1
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 9.6e-29 130.6 131 55.0
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 9.6e-29 130.6 130 53.1
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 1.3e-28 130.2 128 55.5
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 1.3e-28 130.2 128 55.5
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.6e-28 129.8 133 54.1
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 2.8e-28 129.0 128 55.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 2.8e-28 129.0 125 55.2
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 4.8e-28 128.3 127 56.7
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 6.2e-28 127.9 136 52.9
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 8.1e-28 127.5 135 51.9
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 8.1e-28 127.5 127 54.3
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.8e-27 126.3 135 51.9
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 1.8e-27 126.3 135 51.9
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.1e-27 125.6 122 55.7
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 3.1e-27 125.6 131 51.1
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 3.1e-27 125.6 135 50.4
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 4.0e-27 125.2 126 54.0
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 6.9e-27 124.4 129 53.5
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 6.9e-27 124.4 125 52.8
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 6.9e-27 124.4 157 47.8
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 9.0e-27 124.0 131 53.4
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 9.0e-27 124.0 136 52.2
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.2e-26 123.6 140 50.0
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.5e-26 123.2 124 54.0
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 1.5e-26 123.2 127 55.9
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.5e-26 123.2 127 51.2
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 2.0e-26 122.9 126 55.6
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 4.5e-26 121.7 127 54.3
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.5e-26 121.7 127 54.3
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 4.5e-26 121.7 124 53.2
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 7.6e-26 120.9 134 50.7
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 9.9e-26 120.6 130 51.5
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-25 120.2 124 53.2
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-25 120.2 124 53.2
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-25 120.2 124 53.2
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 1.3e-25 120.2 125 51.2
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 1.7e-25 119.8 132 51.5
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 2.2e-25 119.4 125 52.0
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 2.9e-25 119.0 129 51.9
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 3.8e-25 118.6 150 46.0
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.9e-25 118.2 126 52.4
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 6.4e-25 117.9 134 50.0
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.4e-24 116.7 125 50.4
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 3.2e-24 115.5 128 50.8
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 4.2e-24 115.2 118 53.4
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 5.5e-24 114.8 125 51.2
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 7.9e-23 110.9 125 48.0
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.3e-22 110.2 125 49.6
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 2.3e-22 109.4 162 41.4
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 3.9e-22 108.6 82 64.6
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 7.4e-21 104.4 99 55.6
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 8.1e-20 100.9 89 51.7
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 1.4e-19 100.1 76 61.8
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.0e-17 94.0 80 56.2
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 2.2e-17 92.8 99 48.5
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 5.5e-16 88.2 130 43.1
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 2.1e-15 86.3 73 56.2
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.7e-15 85.9 125 42.4
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 1.0e-14 84.0 102 44.1
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 5.7e-13 78.2 134 45.5
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 8.2e-12 74.3 96 40.6
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.8e-11 73.2 125 40.0
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 9.0e-11 70.9 115 40.0
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.3e-09 67.0 115 36.5
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 1.7e-09 66.6 114 44.7
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.9e-08 63.2 98 40.8
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.9e-08 63.2 98 40.8
Actinidia40026 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.5e-08 62.8 62 61.3
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 3.6e-07 58.9 87 42.5
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.8e-06 56.6 87 41.4
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 3.9e-06 55.5 87 41.4
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 5.1e-06 55.1 89 40.4
CAN.G888.2 Capsicum annuum HOM05D006467 ORTHO05D008012 5.1e-06 55.1 57 57.9


User provided reference genes

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