Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 3.0e-76 288.9 199 100.0
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 7.2e-70 267.7 201 94.5
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 7.2e-62 241.1 201 86.6
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 2.0e-32 143.3 196 64.3
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 7.7e-32 141.4 203 64.5
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 1.8e-28 130.2 187 60.4
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 2.6e-27 126.3 156 67.9
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 5.4e-25 118.6 196 58.2
Nitab4.5_0000643g0260 Nicotiana tabacum HOM05D007476 ORTHO05D006998 2.0e-24 116.7 201 60.7
Nitab4.5_0002073g0060 Nicotiana tabacum HOM05D000217 ORTHO05D000121 3.5e-16 89.4 179 57.5
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 6.6e-15 85.1 207 49.8
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 5.6e-14 82.0 130 67.7
Nitab4.5_0008580g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 3.6e-13 79.3 156 60.9
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 1.1e-12 77.8 198 40.4
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 2.3e-12 76.6 195 52.3
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 2.0e-11 73.6 190 45.8
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 2.6e-11 73.2 125 66.4
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.6e-11 73.2 213 44.6
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 3.4e-11 72.8 192 52.6
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 9.8e-11 71.2 207 48.8
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 3.7e-10 69.3 219 44.3
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 3.7e-10 69.3 205 41.0
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 1.1e-09 67.8 196 44.9
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.4e-09 66.6 157 47.1
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 5.4e-09 65.5 203 43.3
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 7.0e-09 65.1 161 45.3
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 7.0e-09 65.1 133 61.7
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 1.6e-08 63.9 194 45.9
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 1.3e-07 60.8 152 51.3
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 2.3e-07 60.1 82 63.4
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 3.0e-07 59.7 197 46.7
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 3.9e-07 59.3 173 49.7
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 5.0e-07 58.9 149 45.6
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 6.6e-07 58.5 172 46.5
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 6.6e-07 58.5 158 46.2
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 8.6e-07 58.2 197 49.7
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.5e-06 57.4 219 42.5
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 1.9e-06 57.0 162 49.4
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 5.6e-06 55.5 238 41.2
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 5.6e-06 55.5 134 44.8
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 9.5e-06 54.7 211 41.2
Migut.L01648 Erythranthe guttata HOM05D020465 ORTHO05D006998 9.5e-06 54.7 156 51.9
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 9.5e-06 54.7 234 37.2


User provided reference genes

Program Settings